RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 DOCK3Q8IZD9 2030 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 HTTP42858 3142 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 GOLGA8BA8MQT2 603 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 PEX10O60683 326 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 SLC25A27O95847 323 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 COPB2P35606 906 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 METAP2P50579 478 aaKnown RBP eCLIP18.64■□□□□ 0.57
BRK1-201ENST00000530758 NTRK3Q16288 839 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.64■□□□□ 0.57
BRK1-201ENST00000530758 PAGR1Q9BTK6 254 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
BRK1-201ENST00000530758 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
BRK1-201ENST00000530758 ISY1Q9ULR0 285 aaKnown RBP18.64■□□□□ 0.57
BRK1-201ENST00000530758 ZNFX1Q9P2E3 1918 aaKnown RBP18.64■□□□□ 0.57
BRK1-201ENST00000530758 CCDC85CA6NKD9 419 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 PFKFB2O60825 505 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 PLEKHA8P1O95397 391 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 ICAM1P05362 532 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
BRK1-201ENST00000530758 RAB11FIP4Q86YS3 637 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 CCDC144CPQ8IYA2 1237 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 ERO1AQ96HE7 468 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 ZSWIM8A7E2V4 1837 aa18.63■□□□□ 0.57
BRK1-201ENST00000530758 ZBTB5O15062 677 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 ST18O60284 1047 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 GNRH1P01148 92 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 CTGFP29279 349 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 MAPK4P31152 587 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 ME3Q16798 604 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 TKFCQ3LXA3 575 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 LARP6Q9BRS8 491 aaKnown RBP18.62■□□□□ 0.57
BRK1-201ENST00000530758 MAF1Q9H063 256 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 PORCNQ9H237 461 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 MROH8Q9H579 483 aa18.62■□□□□ 0.57
BRK1-201ENST00000530758 RAVER2Q9HCJ3 691 aaKnown RBP18.62■□□□□ 0.57
BRK1-201ENST00000530758 CTDP1Q9Y5B0 961 aaPredicted RBP18.62■□□□□ 0.57
BRK1-201ENST00000530758 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 IFNAR1P17181 557 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 MCM2P49736 904 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 CDC37Q16543 378 aaPredicted RBP18.61■□□□□ 0.57
BRK1-201ENST00000530758 QRICH1Q2TAL8 776 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
BRK1-201ENST00000530758 CPXCR1Q8N123 301 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 ZSCAN31Q96LW9 406 aaPredicted RBP18.61■□□□□ 0.57
BRK1-201ENST00000530758 AGBL1Q96MI9 1066 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 RIPK3Q9Y572 518 aa18.61■□□□□ 0.57
BRK1-201ENST00000530758 PLXNB2O15031 1838 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 STRNO43815 780 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 ERCC3P19447 782 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 PSMC4P43686 418 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 SNAP25P60880 206 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 SCRN1Q12765 414 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 KIF22Q14807 665 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 ARHGEF6Q15052 776 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 SNRNP48Q6IEG0 339 aaKnown RBP18.6■□□□□ 0.57
BRK1-201ENST00000530758 CHST13Q8NET6 341 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 PIGSQ96S52 555 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 SLKQ9H2G2 1235 aaPredicted RBP18.6■□□□□ 0.57
BRK1-201ENST00000530758 EFCC1Q9HA90 598 aa18.6■□□□□ 0.57
BRK1-201ENST00000530758 NAP1L2Q9ULW6 460 aaPredicted RBP18.6■□□□□ 0.57
BRK1-201ENST00000530758 PRPF3O43395 683 aaKnown RBP18.59■□□□□ 0.57
BRK1-201ENST00000530758 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
BRK1-201ENST00000530758 FCGRTP55899 365 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
BRK1-201ENST00000530758 TRAF1Q13077 416 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 PLS1Q14651 629 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 CCDC174Q6PII3 467 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 ABRAQ8N0Z2 381 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 CMTR1Q8N1G2 835 aaKnown RBP18.59■□□□□ 0.57
BRK1-201ENST00000530758 CD99L2Q8TCZ2 262 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 GTF3C6Q969F1 213 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 RRP36Q96EU6 259 aaKnown RBP18.59■□□□□ 0.57
BRK1-201ENST00000530758 TRIM47Q96LD4 638 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 FBXO40Q9UH90 709 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 GJD2Q9UKL4 321 aa18.59■□□□□ 0.57
BRK1-201ENST00000530758 ZNF236Q9UL36 1845 aa18.58■□□□□ 0.57
BRK1-201ENST00000530758 PPP1R11O60927 126 aaPredicted RBP18.58■□□□□ 0.56
BRK1-201ENST00000530758 LARGE1O95461 756 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 OTOP1Q7RTM1 612 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 GPR142Q7Z601 462 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 PLEKHH3Q7Z736 793 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 FBXO11Q86XK2 927 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 RGS22Q8NE09 1264 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 RNF26Q9BY78 433 aaPredicted RBP18.58■□□□□ 0.56
BRK1-201ENST00000530758 ARHGAP39Q9C0H5 1083 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 NCOA5Q9HCD5 579 aaKnown RBP18.58■□□□□ 0.56
BRK1-201ENST00000530758 SH2B1Q9NRF2 756 aaPredicted RBP18.58■□□□□ 0.56
BRK1-201ENST00000530758 RBM27Q9P2N5 1060 aaKnown RBP18.58■□□□□ 0.56
BRK1-201ENST00000530758 CCPG1Q9ULG6 757 aa18.58■□□□□ 0.56
BRK1-201ENST00000530758 CD2BP2O95400 341 aaKnown RBP18.57■□□□□ 0.56
BRK1-201ENST00000530758 PTPREP23469 700 aa18.57■□□□□ 0.56
BRK1-201ENST00000530758 RGS19P49795 217 aa18.57■□□□□ 0.56
BRK1-201ENST00000530758 PRMT2P55345 433 aa18.57■□□□□ 0.56
BRK1-201ENST00000530758 STK3Q13188 491 aa18.57■□□□□ 0.56
BRK1-201ENST00000530758 PKN2Q16513 984 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms