RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 IRX3P78415 501 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 ATP2B2Q01814 1243 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 AKAP17AQ02040 695 aaKnown RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 CTDSPL2Q05D32 466 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 IKQ13123 557 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 MAP2K5Q13163 448 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 LRIT3Q3SXY7 679 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 RCSD1Q6JBY9 416 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 GPR153Q6NV75 609 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L2Q6R6M4 530 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 RUFY3Q7L099 469 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 Q7L0L9 218 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 PLEKHH3Q7Z736 793 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 DGKHQ86XP1 1220 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 CLEC10AQ8IUN9 316 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 STK11IPQ8N1F8 1099 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 SLC44A5Q8NCS7 719 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 GPRC5AQ8NFJ5 357 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 NEDD1Q8NHV4 660 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 CTCFLQ8NI51 663 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 GTF3C2Q8WUA4 911 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 SOCS4Q8WXH5 440 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 LPAR1Q92633 364 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 KCNB2Q92953 911 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 ZSCAN10Q96SZ4 725 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 APBA2Q99767 749 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 NUDT12Q9BQG2 462 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 NBPF3Q9H094 633 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 C11orf49Q9H6J7 331 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 SH2B1Q9NRF2 756 aaPredicted RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 RBM28Q9NW13 759 aaKnown RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 RABGAP1Q9Y3P9 1069 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 SNX14Q9Y5W7 946 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 SLC12A7Q9Y666 1083 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 LAMA4Q16363 1823 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 TNKSO95271 1327 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 CPLX1O14810 134 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 PRDM1O75626 825 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 DDAH1O94760 285 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 FGRP09769 529 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 CYBAP13498 195 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 XBP1P17861 261 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 RASA1P20936 1047 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 RPS6KB1P23443 525 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 RGS2P41220 211 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 LIFRP42702 1097 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 NEK4P51957 841 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 SEPT2Q15019 361 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 SNX17Q15036 470 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 GPATCH4Q5T3I0 446 aaKnown RBP5.57□□□□□ -1.52
SSBP3-213ENST00000530618 TBC1D10CQ8IV04 446 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 REPS2Q8NFH8 660 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 DYNLL2Q96FJ2 89 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 LZTS2Q9BRK4 669 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 PAGR1Q9BTK6 254 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.57□□□□□ -1.52
SSBP3-213ENST00000530618 ZSWIM6Q9HCJ5 1215 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 MTMR10Q9NXD2 777 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 ZSWIM5Q9P217 1185 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 NYAP2Q9P242 653 aa5.57□□□□□ -1.52
SSBP3-213ENST00000530618 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.57□□□□□ -1.52
SSBP3-213ENST00000530618 PTPRSQ13332 1948 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 NEDD4P46934 1319 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 CYP2D7A0A087X1C5 515 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 SLC15A5A6NIM6 579 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 GOLGA8BA8MQT2 603 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 ZBTB43O43298 467 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 COBLO75128 1261 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 FDX1P10109 184 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 PDIA4P13667 645 aaKnown RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 AKR1B1P15121 316 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 CYP2C19P33261 490 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 SLC1A4P43007 532 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 METAP2P50579 478 aaKnown RBP eCLIP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 ZYXQ15942 572 aaKnown RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 CCDC96Q2M329 555 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 ASPRV1Q53RT3 343 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 FAM47AQ5JRC9 791 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 FAM160B2Q86V87 743 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 MB21D2Q8IYB1 491 aaPredicted RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 TRIM22Q8IYM9 498 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 TDHQ8IZJ6 230 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 FBXL16Q8N461 479 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 PNMA1Q8ND90 353 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 GMCL1P1Q8NEA9 526 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 CHURC1Q8WUH1 139 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 DCAF4Q8WV16 495 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 WASF1Q92558 559 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 IL17RAQ96F46 866 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 CEP95Q96GE4 821 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms