RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TBX21Q9UL17 535 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 MROH7Q68CQ1 1323 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 M0R2C6 588 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 ADCY6O43306 1168 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 ASGR1P07306 291 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 C6orf222P0C671 652 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-219ENST00000530495 GJA9P57773 515 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 NKX3-2P78367 333 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-219ENST00000530495 MFSD5Q6N075 450 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 NEDD1Q8NHV4 660 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 SPC25Q9HBM1 224 aa17.79■□□□□ 0.44
CAPN1-219ENST00000530495 EYSQ5T1H1 3165 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 BMP3P12645 472 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 FOSL2P15408 326 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
CAPN1-219ENST00000530495 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 SLFN13Q68D06 897 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
CAPN1-219ENST00000530495 ARVCFO00192 962 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 PDE4BQ07343 736 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 C16orf59Q7L2K0 433 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 LRRC47Q8N1G4 583 aaKnown RBP17.77■□□□□ 0.44
CAPN1-219ENST00000530495 VTI1AQ96AJ9 217 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 KATNBL1Q9H079 304 aa17.77■□□□□ 0.44
CAPN1-219ENST00000530495 PLIN4Q96Q06 1357 aa17.77■□□□□ 0.43
CAPN1-219ENST00000530495 A0A0U1RQG5 324 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-219ENST00000530495 CTAGE5O15320 804 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 TSPY3P0CV98 308 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 TSPY8P0CW00 308 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 DNAJB2P25686 324 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 TFAP4Q01664 338 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 CNTN2Q02246 1040 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 PPIGQ13427 754 aaKnown RBP eCLIP17.76■□□□□ 0.436e-13■■□□□ 11.7
CAPN1-219ENST00000530495 GRIN2CQ14957 1233 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 FAM133AQ8N9E0 248 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 GMCL1Q96IK5 515 aa17.76■□□□□ 0.43
CAPN1-219ENST00000530495 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.76■□□□□ 0.435e-8■■□□□ 13.2
CAPN1-219ENST00000530495 TMEM232C9JQI7 657 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 SLC3A2P08195 630 aaKnown RBP17.75■□□□□ 0.43
CAPN1-219ENST00000530495 STAT2P52630 851 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 TMEM240Q5SV17 173 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 FAM126BQ8IXS8 530 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 STAG1Q8WVM7 1258 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 SEC62Q99442 399 aaKnown RBP17.75■□□□□ 0.43
CAPN1-219ENST00000530495 ZNF576Q9H609 170 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 ACAD9Q9H845 621 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 HOMER2Q9NSB8 354 aa17.75■□□□□ 0.43
CAPN1-219ENST00000530495 ZNF536O15090 1300 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 TTC41PQ6P2S7 1318 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 PRUNE2Q8WUY3 3088 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 PLA2G6O60733 806 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 TNFAIP2Q03169 654 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 PPARAQ07869 468 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 TKFCQ3LXA3 575 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 AGBL1Q96MI9 1066 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 NAPBQ9H115 298 aa17.74■□□□□ 0.43
CAPN1-219ENST00000530495 SOWAHBA6NEL2 793 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 ASB14A6NK59 587 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 ERC2O15083 957 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 TLR3O15455 904 aaKnown RBP17.73■□□□□ 0.43
CAPN1-219ENST00000530495 CD4P01730 458 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 CSF2RAP15509 400 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 SLC1A4P43007 532 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 ZMYM1Q5SVZ6 1142 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 SLC43A3Q8NBI5 491 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 PI4K2BQ8TCG2 481 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 TIFAQ96CG3 184 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
CAPN1-219ENST00000530495 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
CAPN1-219ENST00000530495 GNEQ9Y223 722 aaKnown RBP17.73■□□□□ 0.43
CAPN1-219ENST00000530495 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-219ENST00000530495 MCCP23508 829 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 BEX3Q00994 111 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 RCSD1Q6JBY9 416 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 ZNF365Q70YC5 407 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
CAPN1-219ENST00000530495 TRERF1Q96PN7 1200 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 ASTN1O14525 1302 aa17.72■□□□□ 0.43
CAPN1-219ENST00000530495 CABYRO75952 493 aa17.71■□□□□ 0.43
CAPN1-219ENST00000530495 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
CAPN1-219ENST00000530495 FSD1Q9BTV5 496 aa17.71■□□□□ 0.43
CAPN1-219ENST00000530495 IL17RBQ9NRM6 502 aa17.71■□□□□ 0.43
CAPN1-219ENST00000530495 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 GRXCR1A8MXD5 290 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 ACRP10323 421 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 ALAS1P13196 640 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 PBX2P40425 430 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-219ENST00000530495 IQSEC1Q6DN90 963 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms