RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
SCN3B-206ENST00000530277 NEFHP12036 1026 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 KRT13P13646 458 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCN3B-206ENST00000530277 NFIXQ14938 502 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 HDXQ7Z353 690 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 TPH2Q8IWU9 490 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 OGFOD1Q8N543 542 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 MARCH10Q8NA82 808 aaPredicted RBP13.76□□□□□ -0.21
SCN3B-206ENST00000530277 ERMNQ8TAM6 284 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 KCNB2Q92953 911 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 HDAC6Q9UBN7 1215 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 KIAA1024Q9UPX6 916 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 ERLIN2O94905 339 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 ABCB4P21439 1286 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 PRCPP42785 496 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 CDR1P51861 262 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCN3B-206ENST00000530277 SAR1BQ9Y6B6 198 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 AGLP35573 1532 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 KIF20AO95235 890 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 HARSP12081 509 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 NAA35Q5VZE5 725 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 CCDC25Q86WR0 208 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 GSPT2Q8IYD1 628 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 PSTPIP2Q9H939 334 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 PRPF3O43395 683 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 C3orf67Q6ZVT6 689 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 LRRN4CLQ8ND94 238 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 BSDC1Q9NW68 430 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 GCNT3O95395 438 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 TFRCP02786 760 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 CCDC65Q8IXS2 484 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 TMEM47Q9BQJ4 181 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 ALDH8A1Q9H2A2 487 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-206ENST00000530277 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 MYO6Q9UM54 1294 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 PCDHA4Q9UN74 947 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L5A8MUK1 530 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 DDAH1O94760 285 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 RASSF7Q02833 373 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 TXLNBQ8N3L3 684 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
SCN3B-206ENST00000530277 SFI1A8K8P3 1242 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 TCP10L2B9ZVM9 353 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 SERPINB2P05120 415 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 BICD1Q96G01 975 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 CEP104O60308 925 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 HSF2BPO75031 334 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 SLC7A5Q01650 507 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 EARS2Q5JPH6 523 aaKnown RBP13.74□□□□□ -0.21
SCN3B-206ENST00000530277 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
SCN3B-206ENST00000530277 TRIML1Q8N9V2 468 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
SCN3B-206ENST00000530277 CHP1Q99653 195 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 CDK8P49336 464 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 KRT26Q7Z3Y9 468 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 LSM14BQ9BX40 385 aaKnown RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 FCER1AP12319 257 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 VEGFAP15692 232 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 HOXA13P31271 388 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 CYP2J2P51589 502 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms