RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GSTM4Q03013 218 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 PTPN11Q06124 597 aaPredicted RBP9.34□□□□□ -0.91
SVIP-204ENST00000530199 C19orf57Q0VDD7 668 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 NFIXQ14938 502 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
SVIP-204ENST00000530199 OSBPL2Q9H1P3 480 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 CACNA2D2Q9NY47 1150 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 PPT2Q9UMR5 302 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 LINC01387J3KSC0 135 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 M0R082 166 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 BPNT1O95861 308 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 MCM4P33991 863 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 CRKLP46109 303 aaKnown RBP9.33□□□□□ -0.92
SVIP-204ENST00000530199 ARL4DP49703 201 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 FAM117BQ6P1L5 589 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 CCDC81Q6ZN84 652 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 REC114Q7Z4M0 266 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 GPC2Q8N158 579 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 ZNF417Q8TAU3 575 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 SHDQ96IW2 340 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 ZNF587Q96SQ5 575 aaPredicted RBP9.33□□□□□ -0.92
SVIP-204ENST00000530199 CARMIL3Q8ND23 1372 aa9.33□□□□□ -0.92
SVIP-204ENST00000530199 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 FZD9O00144 591 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 TRAF5O00463 557 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 CYP11A1P05108 521 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 ZNF165P49910 485 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 RPL6Q02878 288 aaKnown RBP9.32□□□□□ -0.92
SVIP-204ENST00000530199 REXO1Q8N1G1 1221 aaKnown RBP9.32□□□□□ -0.92
SVIP-204ENST00000530199 EDARADDQ8WWZ3 215 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 KCNB2Q92953 911 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 ANAPC16Q96DE5 110 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 NRSN2Q9GZP1 204 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 PIF1Q9H611 641 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 BRMS1Q9HCU9 246 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
SVIP-204ENST00000530199 FSCN2O14926 492 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 PDE6BP35913 854 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 ANKS3Q6ZW76 656 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 USP50Q70EL3 339 aaPredicted RBP9.31□□□□□ -0.92
SVIP-204ENST00000530199 CHSY3Q70JA7 882 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
SVIP-204ENST00000530199 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 GALNT6Q8NCL4 622 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 ZNF622Q969S3 477 aaKnown RBP eCLIP9.31□□□□□ -0.921e-6■■□□□ 14.2
SVIP-204ENST00000530199 RNF186Q9NXI6 227 aa9.31□□□□□ -0.92
SVIP-204ENST00000530199 TRIOBPQ9H2D6 2365 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 KLF4O43474 513 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 CELF2O95319 508 aaKnown RBP9.3□□□□□ -0.92
SVIP-204ENST00000530199 PHKG2P15735 406 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 SERINC3Q13530 473 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.3□□□□□ -0.92
SVIP-204ENST00000530199 IRF7Q92985 503 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 BTBD6Q96KE9 485 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 FERD3LQ96RJ6 166 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 CORO1BQ9BR76 489 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 BRIP1Q9BX63 1249 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 ZC3H12CQ9C0D7 883 aaKnown RBP9.3□□□□□ -0.92
SVIP-204ENST00000530199 PRDM6Q9NQX0 595 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 PRKAG3Q9UGI9 489 aa9.3□□□□□ -0.92
SVIP-204ENST00000530199 RANBP2P49792 3224 aaKnown RBP9.29□□□□□ -0.92
SVIP-204ENST00000530199 A0A1W2PP64 1363 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 ERVV-2B6SEH9 535 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 OIP5O43482 229 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 ECEL1O95672 775 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 MAOBP27338 520 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 CANXP27824 592 aaKnown RBP9.29□□□□□ -0.92
SVIP-204ENST00000530199 GIPRP48546 466 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 EIF6P56537 245 aaKnown RBP9.29□□□□□ -0.92
SVIP-204ENST00000530199 CLCQ05315 142 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 POU4F3Q15319 338 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 INTS5Q6P9B9 1019 aaKnown RBP9.29□□□□□ -0.92
SVIP-204ENST00000530199 GK5Q6ZS86 529 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 IFNL2Q8IZJ0 200 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 GPBAR1Q8TDU6 330 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 KRT82Q9NSB4 513 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 NARFQ9UHQ1 456 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 ZNRF3Q9ULT6 936 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 ANKRD31Q8N7Z5 1873 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 BRCA2P51587 3418 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 ARFGEF2Q9Y6D5 1785 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 UNC80Q8N2C7 3258 aa9.29□□□□□ -0.92
SVIP-204ENST00000530199 SLX4Q8IY92 1834 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
SVIP-204ENST00000530199 KIF24Q5T7B8 1368 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 FAM155AB1AL88 458 aaPredicted RBP9.28□□□□□ -0.92
SVIP-204ENST00000530199 TM4SF5O14894 197 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 FBLN1P23142 703 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 RAB33AQ14088 237 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 BMS1Q14692 1282 aaKnown RBP9.28□□□□□ -0.92
SVIP-204ENST00000530199 FBXW10Q5XX13 1052 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 STYK1Q6J9G0 422 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 FBXO46Q6PJ61 603 aaPredicted RBP9.28□□□□□ -0.92
SVIP-204ENST00000530199 KLHDC7BQ96G42 594 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 COG3Q96JB2 828 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms