RNA–Protein interactions for RNA: ENST00000529999.5

PUF60-215, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-215ENST00000529999 TMX2Q9Y320 296 aa16.8■□□□□ 0.28
PUF60-215ENST00000529999 SLC12A7Q9Y666 1083 aa16.8■□□□□ 0.28
PUF60-215ENST00000529999 A0A1W2PRG0 241 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 ZBTB43O43298 467 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 PFKFB2O60825 505 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
PUF60-215ENST00000529999 ME3Q16798 604 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 LRIT3Q3SXY7 679 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 CATIPQ7Z7H3 387 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 TMX3Q96JJ7 454 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 SH2D4AQ9H788 454 aa16.79■□□□□ 0.28
PUF60-215ENST00000529999 LARGE1O95461 756 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 SNHG28P0DPA3 235 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 BECN1Q14457 450 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 GMCL1P1Q8NEA9 526 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 LARP6Q9BRS8 491 aaKnown RBP16.78■□□□□ 0.28
PUF60-215ENST00000529999 KIAA1683Q9H0B3 1180 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 PORCNQ9H237 461 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
PUF60-215ENST00000529999 PFASO15067 1338 aa16.77■□□□□ 0.28
PUF60-215ENST00000529999 CCND3P30281 292 aaPredicted RBP16.77■□□□□ 0.28
PUF60-215ENST00000529999 CUL4AQ13619 759 aa16.77■□□□□ 0.28
PUF60-215ENST00000529999 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
PUF60-215ENST00000529999 ACER1Q8TDN7 264 aa16.77■□□□□ 0.28
PUF60-215ENST00000529999 USP6NLQ92738 828 aa16.77■□□□□ 0.28
PUF60-215ENST00000529999 FEZ1Q99689 392 aa16.77■□□□□ 0.28
PUF60-215ENST00000529999 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.28
PUF60-215ENST00000529999 LAMA3Q16787 3333 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 METAP2P50579 478 aaKnown RBP eCLIP16.76■□□□□ 0.27
PUF60-215ENST00000529999 CCNA1P78396 465 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 ZYXQ15942 572 aaKnown RBP16.76■□□□□ 0.27
PUF60-215ENST00000529999 CCL14Q16627 93 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 MORN1Q5T089 497 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 WDR78Q5VTH9 848 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 Q7L0L9 218 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 APBA2Q99767 749 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 VCPKMTQ9H867 229 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
PUF60-215ENST00000529999 RLFQ13129 1914 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 ALPK3Q96L96 1907 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 CCDC196A0A1B0GTZ2 297 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 F5H6K3 240 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 PDHBP11177 359 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 COL6A1P12109 1028 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP14P54578 494 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 KLRC3Q07444 240 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 SCRN1Q12765 414 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 MAP2K5Q13163 448 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 GRM4Q14833 912 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 MFSD14CQ5VZR4 134 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 LHX8Q68G74 356 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 LRRC47Q8N1G4 583 aaKnown RBP16.75■□□□□ 0.27
PUF60-215ENST00000529999 DCAF4Q8WV16 495 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 LPAR1Q92633 364 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 C12orf42Q96LP6 360 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 MYL10Q9BUA6 226 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
PUF60-215ENST00000529999 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
PUF60-215ENST00000529999 STXBP5LQ9Y2K9 1186 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 RABGAP1Q9Y3P9 1069 aa16.75■□□□□ 0.27
PUF60-215ENST00000529999 PALM3A6NDB9 673 aaPredicted RBP16.74■□□□□ 0.27
PUF60-215ENST00000529999 GOLGA8AA7E2F4 631 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
PUF60-215ENST00000529999 KIF5BP33176 963 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 MDM2Q00987 491 aaPredicted RBP16.74■□□□□ 0.27
PUF60-215ENST00000529999 ST3GAL1Q11201 340 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 RTN1Q16799 776 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 LRRC26Q2I0M4 334 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 ASPRV1Q53RT3 343 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
PUF60-215ENST00000529999 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
PUF60-215ENST00000529999 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
PUF60-215ENST00000529999 COL6A3P12111 3177 aa16.73■□□□□ 0.27
PUF60-215ENST00000529999 BAZ2BQ9UIF8 2168 aaKnown RBP16.73■□□□□ 0.27
PUF60-215ENST00000529999 NDUFB10O96000 172 aa16.73■□□□□ 0.27
PUF60-215ENST00000529999 SMARCA1P28370 1054 aa16.73■□□□□ 0.27
PUF60-215ENST00000529999 CNGA1P29973 690 aa16.73■□□□□ 0.27
PUF60-215ENST00000529999 CDC27P30260 824 aa16.73■□□□□ 0.27
PUF60-215ENST00000529999 GNAQP50148 359 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms