RNA–Protein interactions for RNA: ENST00000529679.1

PSMD13-210, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 2

Gene PSMD13, Length 507 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-210	ENST00000529679	SIAH1	Q8IUQ4	282 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	MB21D1	Q8N884	522 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	TMEM47	Q9BQJ4	181 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	LLPH	Q9BRT6	129 aa	Known RBP	10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	PORCN	Q9H237	461 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	RBM28	Q9NW13	759 aa	Known RBP	10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	HTT	P42858	3142 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	LOC285556	D6RIA3	1793 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	LARGE1	O95461	756 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	HMGCR	P04035	888 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	GJB1	P08034	283 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	RGS2	P41220	211 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	GNAQ	P50148	359 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	SCRN1	Q12765	414 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	PLS1	Q14651	629 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	RTN1	Q16799	776 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	TRMT44	Q8IYL2	757 aa	Known RBP	10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	PIP4P2	Q8N4L2	257 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	GMCL1P1	Q8NEA9	526 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	CTCFL	Q8NI51	663 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	LARP6	Q9BRS8	491 aa	Known RBP	10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	SENP2	Q9HC62	589 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	BTBD7	Q9P203	1132 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	CLIP2	Q9UDT6	1046 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	GJD2	Q9UKL4	321 aa		10.8	□□□□□ -0.68
PSMD13-210	ENST00000529679	CPLX1	O14810	134 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	CNMD	O75829	334 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	SNHG28	P0DPA3	235 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	XRCC5	P13010	732 aa	Known RBP	10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	GJA8	P48165	433 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	HMGN5	P82970	282 aa	Known RBP	10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	STK3	Q13188	491 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	KIAA1755	Q5JYT7	1200 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	FAM83B	Q5T0W9	1011 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	POTEE	Q6S8J3	1075 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	CCDC83	Q8IWF9	413 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	FANCB	Q8NB91	859 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	NUP133	Q8WUM0	1156 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	DCAF4	Q8WV16	495 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	ATG4C	Q96DT6	458 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	LZTS2	Q9BRK4	669 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	SPATC1L	Q9H0A9	340 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	UNC93B1	Q9H1C4	597 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	ISY1	Q9ULR0	285 aa	Known RBP	10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	KIF3A	Q9Y496	699 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	PHIP	Q8WWQ0	1821 aa		10.79	□□□□□ -0.68
PSMD13-210	ENST00000529679	SLC15A5	A6NIM6	579 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679		F5H6K3	240 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	NDUFB10	O96000	172 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	TFRC	P02786	760 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	PDIA4	P13667	645 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	CAPN2	P17655	700 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	PTPRE	P23469	700 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	CCT2	P78371	535 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	KLRC3	Q07444	240 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	ST3GAL1	Q11201	340 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	MAP2K5	Q13163	448 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	GRM4	Q14833	912 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	ASPRV1	Q53RT3	343 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	GPATCH4	Q5T3I0	446 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	LRRC47	Q8N1G4	583 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	NECAB1	Q8N987	351 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	SHCBP1	Q8NEM2	672 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	U2AF1L4	Q8WU68	220 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	GMCL1	Q96IK5	515 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	DEFB118	Q96PH6	123 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	APBA2	Q99767	749 aa		10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	HMX1	Q9NP08	348 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	RBM27	Q9P2N5	1060 aa	Known RBP	10.78	□□□□□ -0.68
PSMD13-210	ENST00000529679	ATAD5	Q96QE3	1844 aa		10.77	□□□□□ -0.68
PSMD13-210	ENST00000529679	STRN	O43815	780 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	SGPL1	O95470	568 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	PARP1	P09874	1014 aa	Known RBP	10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	PDHB	P11177	359 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	PRKAR2A	P13861	404 aa	Known RBP	10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	IFNAR1	P17181	557 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	ERCC3	P19447	782 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	SMARCA1	P28370	1054 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	MORN1	Q5T089	497 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	MFSD14C	Q5VZR4	134 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	TMTC3	Q6ZXV5	915 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	DPP9	Q86TI2	863 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	NCAPG2	Q86XI2	1143 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	NSUN7	Q8NE18	718 aa	Known RBP	10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	SMARCC2	Q8TAQ2	1214 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	TRIB2	Q92519	343 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	NUP88	Q99567	741 aa	Predicted RBP	10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	SLF1	Q9BQI6	1058 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	MYL10	Q9BUA6	226 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	MROH8	Q9H579	483 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	FBXO28	Q9NVF7	368 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	SLC5A4	Q9NY91	659 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	PPP1R9A	Q9ULJ8	1098 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	SMC3	Q9UQE7	1217 aa		10.77	□□□□□ -0.69
PSMD13-210	ENST00000529679	RPTOR	Q8N122	1335 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms