RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 TAP1Q03518 808 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 TTF1Q15361 905 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 CXCL17Q6UXB2 119 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 ARMCX2Q7L311 632 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 PRPF38AQ8NAV1 312 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 SLF1Q9BQI6 1058 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 KATNBL1Q9H079 304 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 TRPV6Q9H1D0 765 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 CD320Q9NPF0 282 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 Q9Y3F1 56 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 EPOPA6NHQ4 379 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 IPO8O15397 1037 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 B4GALT4O60513 344 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 ZBED4O75132 1171 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 RFC2P35250 354 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 BEX3Q00994 111 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 EVX2Q03828 476 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 TTLL4Q14679 1199 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 FAM83BQ5T0W9 1011 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 SLC9C2Q5TAH2 1124 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 GJD3Q8N144 294 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 ANKRD35Q8N283 1001 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 CHST13Q8NET6 341 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 ARNTL2Q8WYA1 636 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 EAF2Q96CJ1 260 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 DYNLL2Q96FJ2 89 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 AP5M1Q9H0R1 490 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 CCDC8Q9H0W5 538 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 CERS4Q9HA82 394 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 ATP8A2Q9NTI2 1148 aa14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 GNEQ9Y223 722 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-207ENST00000529553 PRRC2BQ5JSZ5 2229 aaKnown RBP14.02□□□□□ -0.16
AMBRA1-207ENST00000529553 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 CYP2D6P10635 497 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 CDK8P49336 464 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 NHLH1Q02575 133 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 GRB10Q13322 594 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 KRT40Q6A162 431 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 FAM178BQ8IXR5 827 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 CCDC144CPQ8IYA2 1237 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 SCLYQ96I15 445 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 FGD4Q96M96 766 aa14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 TLR7Q9NYK1 1049 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-207ENST00000529553 ASTN1O14525 1302 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 ASB14A6NK59 587 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 PDE6AP16499 860 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 C12orf60Q5U649 245 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 IQSEC1Q6DN90 963 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 C16orf86Q6ZW13 317 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 AMOTL1Q8IY63 956 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 SDR42E1Q8WUS8 393 aa14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 ALDH8A1Q9H2A2 487 aaPredicted RBP14.01□□□□□ -0.17
AMBRA1-207ENST00000529553 LPXNO60711 386 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 OAZ1P54368 228 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 CSPP1Q1MSJ5 1256 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 LEXMQ3ZCV2 418 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 TLK2Q86UE8 772 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 HERC6Q8IVU3 1022 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 SLC38A10Q9HBR0 1119 aa14□□□□□ -0.17
AMBRA1-207ENST00000529553 CTDP1Q9Y5B0 961 aaPredicted RBP14□□□□□ -0.17
AMBRA1-207ENST00000529553 ZNF532Q9HCE3 1301 aa13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 DYNC1LI2O43237 492 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 RAD21O60216 631 aa13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 FDX1P10109 184 aa13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 PUS10Q3MIT2 529 aaKnown RBP13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 UBE2ZQ9H832 354 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-207ENST00000529553 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 F5H6K3 240 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 BCAR3O75815 825 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 KLRC3Q07444 240 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 DEFB128Q7Z7B8 93 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 FAM133AQ8N9E0 248 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 FBXL18Q96ME1 805 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 NYAP2Q9P242 653 aa13.98□□□□□ -0.17
AMBRA1-207ENST00000529553 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 USP17L21D6R901 530 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 TRIM27P14373 513 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 SMPD1P17405 629 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 CNTN2Q02246 1040 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 DDRGK1Q96HY6 314 aa13.97□□□□□ -0.17
AMBRA1-207ENST00000529553 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms