RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 CYTH3O43739 400 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 LARGE1O95461 756 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 FDX1P10109 184 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 CTCFP49711 727 aaPredicted RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 Q3C1V9 767 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 CCAR1Q8IX12 1150 aaKnown RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 NECAB1Q8N987 351 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 LZTS2Q9BRK4 669 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 MOV10L1Q9BXT6 1211 aaKnown RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 TEX13BQ9BXU2 312 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
CHD7-209ENST00000529472 LIMCH1Q9UPQ0 1083 aa13.25□□□□□ -0.29
CHD7-209ENST00000529472 ZNF536O15090 1300 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 FKTNO75072 461 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 CD2BP2O95400 341 aaKnown RBP13.24□□□□□ -0.29
CHD7-209ENST00000529472 STAT3P40763 770 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 LBX1P52954 281 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 CCNA1P78396 465 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 LACTBP83111 547 aaPredicted RBP13.24□□□□□ -0.29
CHD7-209ENST00000529472 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 ME3Q16798 604 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 USH1GQ495M9 461 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 PIGSQ96S52 555 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 PORCNQ9H237 461 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 CWC22Q9HCG8 908 aaKnown RBP13.24□□□□□ -0.29
CHD7-209ENST00000529472 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 MGAMO43451 1857 aa13.24□□□□□ -0.29
CHD7-209ENST00000529472 CASP8AP2Q9UKL3 1982 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 CPLX1O14810 134 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 PFKFB2O60825 505 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 PPFIA3O75145 1194 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 ICAM1P05362 532 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 ALAS1P13196 640 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 OAZ1P54368 228 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 SCRN1Q12765 414 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 KIF22Q14807 665 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 QRICH1Q2TAL8 776 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
CHD7-209ENST00000529472 PHKBQ93100 1093 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
CHD7-209ENST00000529472 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 SEC63Q9UGP8 760 aaKnown RBP13.23□□□□□ -0.29
CHD7-209ENST00000529472 RIPK3Q9Y572 518 aa13.23□□□□□ -0.29
CHD7-209ENST00000529472 SMCHD1A6NHR9 2005 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 ATP2A1O14983 1001 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 ZBTB5O15062 677 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
CHD7-209ENST00000529472 DTNBO60941 627 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
CHD7-209ENST00000529472 ERCC3P19447 782 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 CTGFP29279 349 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 PSMC4P43686 418 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 CAP1Q01518 475 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 FUT2Q10981 343 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 ERO1AQ96HE7 468 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 SLC26A6Q9BXS9 759 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 PLXNB2O15031 1838 aa13.22□□□□□ -0.29
CHD7-209ENST00000529472 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
CHD7-209ENST00000529472 SLC25A27O95847 323 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 MAPK4P31152 587 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 FCGRTP55899 365 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 CPLX2Q6PUV4 134 aaKnown RBP13.21□□□□□ -0.29
CHD7-209ENST00000529472 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.29
CHD7-209ENST00000529472 AMNQ9BXJ7 453 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 MROH8Q9H579 483 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 RNF146Q9NTX7 359 aa13.21□□□□□ -0.29
CHD7-209ENST00000529472 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
CHD7-209ENST00000529472 CDKL5O76039 1030 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 IFNAR1P17181 557 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 COPB2P35606 906 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 MCM2P49736 904 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
CHD7-209ENST00000529472 ST3GAL1Q11201 340 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 NTRK3Q16288 839 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
CHD7-209ENST00000529472 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms