RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SMARCC1Q92922 1105 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-212ENST00000529046 ZNF512BQ96KM6 892 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-212ENST00000529046 SLC6A18Q96N87 628 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 HIRIP3Q9BW71 556 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-212ENST00000529046 ACTR10Q9NZ32 417 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 ABCC2Q92887 1545 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 PLB1Q6P1J6 1458 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 RAPGEF2Q9Y4G8 1499 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 IQGAP2Q13576 1575 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 TEKQ02763 1124 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 MESP2Q0VG99 397 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 PKN1Q16512 942 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 PRR23BQ6ZRT6 265 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 ANKS3Q6ZW76 656 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 TMC3Q7Z5M5 1100 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 PPFIBP1Q86W92 1011 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 OXR1Q8N573 874 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 DAGLBQ8NCG7 672 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
CSDE1-212ENST00000529046 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
CSDE1-212ENST00000529046 UGGT2Q9NYU1 1516 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 FITM1A5D6W6 292 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 C9IYK1 514 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 SHOXO15266 292 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 DUSP4Q13115 394 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 SNW1Q13573 536 aaKnown RBP7.28□□□□□ -1.24
CSDE1-212ENST00000529046 RNF111Q6ZNA4 994 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 ZNF655Q8N720 491 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-212ENST00000529046 TCTN2Q96GX1 697 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 PRR13Q9NZ81 148 aa7.28□□□□□ -1.24
CSDE1-212ENST00000529046 UACAQ9BZF9 1416 aa7.27□□□□□ -1.24
CSDE1-212ENST00000529046 DISP1Q96F81 1524 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 SSU72P8A0A1W2PR75 194 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 TRHRP34981 398 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-212ENST00000529046 GTF2F1P35269 517 aaKnown RBP eCLIP7.27□□□□□ -1.251e-7■■■■■ 29.4
CSDE1-212ENST00000529046 ZNF124Q15973 351 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 SOGA3Q5TF21 947 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 LILRA2Q8N149 483 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 CELF2-AS1Q8N7Q2 184 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 HNRNPLLQ8WVV9 542 aaKnown RBP7.27□□□□□ -1.25
CSDE1-212ENST00000529046 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 PRDM14Q9GZV8 571 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 C19orf44Q9H6X5 657 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 GLI2P10070 1586 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 KDM5BQ9UGL1 1544 aa7.27□□□□□ -1.25
CSDE1-212ENST00000529046 FAM86C2PA6NEL3 165 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 CBFA2T2O43439 604 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 SIGLEC6O43699 453 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 PRAMEF1O95521 474 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 PCBP3P57721 371 aaKnown RBP7.26□□□□□ -1.25
CSDE1-212ENST00000529046 CHRNEQ04844 493 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 DDR2Q16832 855 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 SPPL2CQ8IUH8 684 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 CKAP2LQ8IYA6 745 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 ANKS4BQ8N8V4 417 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 MICAL1Q8TDZ2 1067 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 FOXP3Q9BZS1 431 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 RNF32Q9H0A6 362 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 NSUN3Q9H649 340 aaKnown RBP7.26□□□□□ -1.25
CSDE1-212ENST00000529046 SP110Q9HB58 689 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 SUSD2Q9UGT4 822 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 TCFL5Q9UL49 500 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 PCDHB12Q9Y5F1 795 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 ASXL2Q76L83 1435 aa7.26□□□□□ -1.25
CSDE1-212ENST00000529046 RPL10P27635 214 aaKnown RBP7.25□□□□□ -1.25
CSDE1-212ENST00000529046 NCAPHQ15003 741 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 NR0B2Q15466 257 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 FXNQ16595 210 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 LRP10Q7Z4F1 713 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 WAPLQ7Z5K2 1190 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 BHLHE22Q8NFJ8 381 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-212ENST00000529046 PPP1R16BQ96T49 567 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 CHST7Q9NS84 486 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 FBXL21Q9UKT6 434 aa7.25□□□□□ -1.25
CSDE1-212ENST00000529046 SYPP08247 313 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 ZNF143P52747 638 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-212ENST00000529046 JAG1P78504 1218 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 SLC7A5Q01650 507 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 TIGD5Q53EQ6 642 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 AXDND1Q5T1B0 1012 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-212ENST00000529046 MRM1Q6IN84 353 aaKnown RBP7.24□□□□□ -1.25
CSDE1-212ENST00000529046 VHLLQ6RSH7 139 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 C7orf61Q8IZ16 206 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 ZNF513Q8N8E2 541 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-212ENST00000529046 FBXO15Q8NCQ5 510 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-212ENST00000529046 LINC00116Q8NCU8 138 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 LINC01599Q8WXQ3 324 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 MKL1Q969V6 931 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 EPB41L4BQ9H329 900 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 GFOD1Q9NXC2 390 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 EBF1Q9UH73 591 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 ZMYM5Q9UJ78 669 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 ZNF281Q9Y2X9 895 aa7.24□□□□□ -1.25
CSDE1-212ENST00000529046 KDM6BO15054 1643 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 FKTNO75072 461 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
CSDE1-212ENST00000529046 PPP2R5EQ16537 467 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms