RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 GSTO1P78417 241 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 CDK17Q00537 523 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 MEA1Q16626 185 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 TPTE2Q6XPS3 522 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 CERS3Q8IU89 383 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 RETREG2Q8NC44 543 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 ACRBPQ8NEB7 543 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 SETDB2Q96T68 719 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 HAUS4Q9H6D7 363 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 L1RE1Q9UN81 338 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 LAMB1P07942 1786 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 MAST2Q6P0Q8 1798 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 TTC26A0AVF1 554 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 NDUFA10O95299 355 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 BAG3O95817 575 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 LDHCP07864 332 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 CCNE1P24864 410 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 OAS2P29728 719 aaKnown RBP9.41□□□□□ -0.9
CSTF3-208ENST00000528865 CDC25AP30304 524 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 UBA7P41226 1012 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 UBXN1Q04323 297 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 STIM1Q13586 685 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 FIGNQ5HY92 759 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 PAPD7Q5XG87 772 aaKnown RBP9.41□□□□□ -0.9
CSTF3-208ENST00000528865 WDR59Q6PJI9 974 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 HDXQ7Z353 690 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 TRAPPC11Q7Z392 1133 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 NEDD1Q8NHV4 660 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 IQCDQ96DY2 449 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 NUP88Q99567 741 aaPredicted RBP9.41□□□□□ -0.9
CSTF3-208ENST00000528865 CHP1Q99653 195 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 DUSP9Q99956 384 aaKnown RBP9.41□□□□□ -0.9
CSTF3-208ENST00000528865 TMEM47Q9BQJ4 181 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 SPZ1Q9BXG8 430 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 TTYH3Q9C0H2 523 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 ZMYND12Q9H0C1 365 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 GBP3Q9H0R5 595 aa9.41□□□□□ -0.9
CSTF3-208ENST00000528865 LUC7L2Q9Y383 392 aaKnown RBP9.41□□□□□ -0.9
CSTF3-208ENST00000528865 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 FLT1P17948 1338 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 ESYT2A0FGR8 921 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 BICDL2A1A5D9 508 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 CTAGE15A4D2H0 777 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 PSMA7O14818 248 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 COBLO75128 1261 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 ERLIN1O75477 346 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 ABL1P00519 1130 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 LDHBP07195 334 aaKnown RBP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 CTAGE8P0CG41 777 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 RASA1P20936 1047 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 PMS1P54277 932 aaKnown RBP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 KRT83P78385 493 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 WDR93Q6P2C0 686 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 FOXR2Q6PJQ5 311 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 KRT25Q7Z3Z0 450 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 CTAGE6Q86UF2 777 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 CTAGE4Q8IX94 777 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 CCDC170Q8IYT3 715 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 RASGRP4Q8TDF6 673 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 LRRC15Q8TF66 581 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
CSTF3-208ENST00000528865 P2RX5Q93086 422 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 EXOC4Q96A65 974 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 SLF1Q9BQI6 1058 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 MYO6Q9UM54 1294 aa9.4□□□□□ -0.9
CSTF3-208ENST00000528865 MYH13Q9UKX3 1938 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 TAF1P21675 1872 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 GPR75-ASB3A0A0A6YYF3 556 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 A0A1W2PQJ5 194 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 EIF3CLB5ME19 914 aaKnown RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 OR52Z1P0C646 297 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 HNRNPH3P31942 346 aaKnown RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 HERVK_113P62684 666 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 ZBED6P86452 979 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 GRAPQ13588 217 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 INF2Q27J81 1249 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 CNNM4Q6P4Q7 775 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 BICDL1Q6ZP65 573 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 C16orf86Q6ZW13 317 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 USP17L1Q7RTZ2 530 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 CABP7Q86V35 215 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-208ENST00000528865 FAM114A1Q8IWE2 563 aa9.39□□□□□ -0.91
CSTF3-208ENST00000528865 AMOTL1Q8IY63 956 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms