RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
SIPA1-204ENST00000528699 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.37
SIPA1-204ENST00000528699 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
SIPA1-204ENST00000528699 CNPY2Q9Y2B0 182 aa12.71□□□□□ -0.37
SIPA1-204ENST00000528699 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
SIPA1-204ENST00000528699 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
SIPA1-204ENST00000528699 RTP1P59025 263 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 HAND2P61296 217 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 LENG1Q96BZ8 264 aaPredicted RBP12.7□□□□□ -0.38
SIPA1-204ENST00000528699 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 TMEM47Q9BQJ4 181 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 RNF146Q9NTX7 359 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 ISY1Q9ULR0 285 aaKnown RBP12.7□□□□□ -0.38
SIPA1-204ENST00000528699 LRRC37A2A6NM11 1700 aa12.7□□□□□ -0.38
SIPA1-204ENST00000528699 NEDD4P46934 1319 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 SYNRGQ9UMZ2 1314 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 MCM3APO60318 1980 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 HIP1O00291 1037 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 PGK1P00558 417 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 TKFCQ3LXA3 575 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 RRP12Q5JTH9 1297 aaKnown RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 BTNL9Q6UXG8 535 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 SLC39A5Q6ZMH5 540 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
SIPA1-204ENST00000528699 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 ZHX1Q9UKY1 873 aaPredicted RBP12.69□□□□□ -0.38
SIPA1-204ENST00000528699 LCTP09848 1927 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 ADCY6O43306 1168 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
SIPA1-204ENST00000528699 NT5C2P49902 561 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 TRIM60Q495X7 471 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 CCDC174Q6PII3 467 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 RNF180Q86T96 592 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
SIPA1-204ENST00000528699 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
SIPA1-204ENST00000528699 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 ATP11BQ9Y2G3 1177 aa12.68□□□□□ -0.38
SIPA1-204ENST00000528699 ASTN1O14525 1302 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 A0A1W2PQ45 241 aaPredicted RBP12.67□□□□□ -0.38
SIPA1-204ENST00000528699 A0A1W2PQY0 241 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 ICAM1P05362 532 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 SNHG28P0DPA3 235 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 PDHBP11177 359 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 SNAP25P60880 206 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
SIPA1-204ENST00000528699 CNTN2Q02246 1040 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 ACVR2BQ13705 512 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 CCDC96Q2M329 555 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 CCSAPQ6IQ19 270 aaPredicted RBP12.67□□□□□ -0.38
SIPA1-204ENST00000528699 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 TTC14Q96N46 770 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 DSCC1Q9BVC3 393 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 ABHD16BQ9H3Z7 469 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
SIPA1-204ENST00000528699 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 ZNF213O14771 459 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 DUSP11O75319 330 aaKnown RBP12.66□□□□□ -0.38
SIPA1-204ENST00000528699 ALAS1P13196 640 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 CHMLP26374 656 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 CST5P28325 142 aaPredicted RBP12.66□□□□□ -0.38
SIPA1-204ENST00000528699 SLC16A2P36021 539 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 MUM1L1Q5H9M0 696 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 ESR2Q92731 530 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
SIPA1-204ENST00000528699 UPF3AQ9H1J1 476 aaKnown RBP12.66□□□□□ -0.38
SIPA1-204ENST00000528699 CYP39A1Q9NYL5 469 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
SIPA1-204ENST00000528699 FRMPD2Q68DX3 1309 aaPredicted RBP12.65□□□□□ -0.38
SIPA1-204ENST00000528699 RAD50Q92878 1312 aa12.65□□□□□ -0.38
SIPA1-204ENST00000528699 LAMA2P24043 3122 aaKnown RBP12.65□□□□□ -0.38
SIPA1-204ENST00000528699 MYADML2A6NDP7 307 aa12.65□□□□□ -0.38
SIPA1-204ENST00000528699 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms