RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 PPIL2Q13356 520 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 SNAPC2Q13487 334 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
RDX-205ENST00000528556 TMTC3Q6ZXV5 915 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 FASTKD5Q7L8L6 764 aaKnown RBP9.75□□□□□ -0.85
RDX-205ENST00000528556 FAM160B2Q86V87 743 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 SIAH1Q8IUQ4 282 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 NSUN7Q8NE18 718 aaKnown RBP9.75□□□□□ -0.85
RDX-205ENST00000528556 KIFC2Q96AC6 838 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 GMCL1Q96IK5 515 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 ALG1Q9BT22 464 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 MAD2L2Q9UI95 211 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 V9GY48 417 aaPredicted RBP9.75□□□□□ -0.85
RDX-205ENST00000528556 PAPPA2Q9BXP8 1791 aa9.75□□□□□ -0.85
RDX-205ENST00000528556 MYH4Q9Y623 1939 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 PALM3A6NDB9 673 aaPredicted RBP9.74□□□□□ -0.85
RDX-205ENST00000528556 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 CXCL11O14625 94 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 FLOT1O75955 427 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 FMNL1O95466 1100 aaPredicted RBP9.74□□□□□ -0.85
RDX-205ENST00000528556 OSBPP22059 807 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 IRX3P78415 501 aaPredicted RBP9.74□□□□□ -0.85
RDX-205ENST00000528556 TRAF1Q13077 416 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 SAFBQ15424 915 aaKnown RBP eCLIP9.74□□□□□ -0.85
RDX-205ENST00000528556 LDLRAD1Q5T700 205 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 TTBK2Q6IQ55 1244 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 RASGRP2Q7LDG7 609 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 HEATR3Q7Z4Q2 680 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 SRBD1Q8N5C6 995 aaKnown RBP9.74□□□□□ -0.85
RDX-205ENST00000528556 C8orf76Q96K31 380 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 RNF26Q9BY78 433 aaPredicted RBP9.74□□□□□ -0.85
RDX-205ENST00000528556 RPAP3Q9H6T3 665 aaPredicted RBP9.74□□□□□ -0.85
RDX-205ENST00000528556 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 AFG3L2Q9Y4W6 797 aa9.74□□□□□ -0.85
RDX-205ENST00000528556 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L15C9J2P7 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L13C9JLJ4 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L11C9JVI0 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L18D6R9N7 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L22D6RA61 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L17D6RBQ6 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L19D6RCP7 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L20D6RJB6 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 IRF6O14896 467 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 PRPF3O43395 683 aaKnown RBP9.73□□□□□ -0.85
RDX-205ENST00000528556 ZBED4O75132 1171 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 CETPP11597 493 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 VCAM1P19320 739 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 SMARCA1P28370 1054 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 GTF2A2P52657 109 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 NUCB2P80303 420 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 USP17L24Q0WX57 530 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 CST9Q5W186 159 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 RGMBQ6NW40 437 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 ADGRF4Q8IZF3 695 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 WNK4Q96J92 1243 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 SLF1Q9BQI6 1058 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 CPVLQ9H3G5 476 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 BRMS1Q9HCU9 246 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 STK36Q9NRP7 1315 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 NID2Q14112 1375 aa9.73□□□□□ -0.85
RDX-205ENST00000528556 GREB1LQ9C091 1923 aaPredicted RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 CCL15-CCL14A0A0B4J2E2 113 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 CTDNEP1O95476 244 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 SNHG28P0DPA3 235 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 SCG2P13521 617 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 PDIA4P13667 645 aaKnown RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 NAPAP54920 295 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 NLRP5P59047 1200 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 GUCY1B3Q02153 619 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 ST3GAL1Q11201 340 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 DGKZQ13574 1117 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 CCL15Q16663 113 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 ARSIQ5FYB1 569 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
RDX-205ENST00000528556 PRPF38AQ8NAV1 312 aaKnown RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 PIGSQ96S52 555 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 SPZ1Q9BXG8 430 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 FAM217BQ9NTX9 383 aaPredicted RBP9.72□□□□□ -0.85
RDX-205ENST00000528556 CHMP5Q9NZZ3 219 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
RDX-205ENST00000528556 PNMA6FA0A0J9YX94 578 aa9.71□□□□□ -0.86
RDX-205ENST00000528556 STX6O43752 255 aa9.71□□□□□ -0.86
RDX-205ENST00000528556 ZBTB48P10074 688 aaPredicted RBP9.71□□□□□ -0.86
RDX-205ENST00000528556 SNAP25P60880 206 aa9.71□□□□□ -0.86
RDX-205ENST00000528556 PLS1Q14651 629 aa9.71□□□□□ -0.86
RDX-205ENST00000528556 COG2Q14746 738 aa9.71□□□□□ -0.86
RDX-205ENST00000528556 NTRK3Q16288 839 aa9.71□□□□□ -0.86
RDX-205ENST00000528556 CDC37Q16543 378 aaPredicted RBP9.71□□□□□ -0.86
RDX-205ENST00000528556 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms