RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CCDC120Q96HB5 630 aa8.83□□□□□ -1
PCF11-202ENST00000528336 CCDC113Q9H0I3 377 aa8.83□□□□□ -1
PCF11-202ENST00000528336 EPN3Q9H201 632 aa8.83□□□□□ -1
PCF11-202ENST00000528336 ZNF281Q9Y2X9 895 aa8.83□□□□□ -1
PCF11-202ENST00000528336 FAM221BA6H8Z2 402 aa8.82□□□□□ -1
PCF11-202ENST00000528336 TBX1O43435 398 aa8.82□□□□□ -1
PCF11-202ENST00000528336 DUSP4Q13115 394 aa8.82□□□□□ -1
PCF11-202ENST00000528336 GRB10Q13322 594 aa8.82□□□□□ -1
PCF11-202ENST00000528336 GTF2IRD2BQ6EKJ0 949 aa8.82□□□□□ -1
PCF11-202ENST00000528336 CBLL1Q75N03 491 aa8.82□□□□□ -1
PCF11-202ENST00000528336 GTF2IRD2Q86UP8 949 aa8.82□□□□□ -1
PCF11-202ENST00000528336 ZNF227Q86WZ6 799 aa8.82□□□□□ -1
PCF11-202ENST00000528336 NAT16Q8N8M0 369 aa8.82□□□□□ -1
PCF11-202ENST00000528336 MRGPRX3Q96LB0 322 aa8.82□□□□□ -1
PCF11-202ENST00000528336 DEPDC7Q96QD5 511 aa8.82□□□□□ -1
PCF11-202ENST00000528336 SRPK1Q96SB4 655 aaKnown RBP8.82□□□□□ -1
PCF11-202ENST00000528336 OSBPL2Q9H1P3 480 aa8.82□□□□□ -1
PCF11-202ENST00000528336 TRIM59Q8IWR1 403 aa8.81□□□□□ -1
PCF11-202ENST00000528336 BTN2A2Q8WVV5 523 aa8.81□□□□□ -1
PCF11-202ENST00000528336 LINC01599Q8WXQ3 324 aa8.81□□□□□ -1
PCF11-202ENST00000528336 G6PC3Q9BUM1 346 aa8.81□□□□□ -1
PCF11-202ENST00000528336 LNPKQ9C0E8 428 aa8.81□□□□□ -1
PCF11-202ENST00000528336 SNTG2Q9NY99 539 aa8.81□□□□□ -1
PCF11-202ENST00000528336 PFDN2Q9UHV9 154 aa8.81□□□□□ -1
PCF11-202ENST00000528336 C2orf71A6NGG8 1288 aa8.8□□□□□ -1
PCF11-202ENST00000528336 AURKAO14965 403 aa8.8□□□□□ -1
PCF11-202ENST00000528336 USP2O75604 605 aaPredicted RBP8.8□□□□□ -1
PCF11-202ENST00000528336 ENDOUP21128 410 aaKnown RBP8.8□□□□□ -1
PCF11-202ENST00000528336 TRHRP34981 398 aaPredicted RBP8.8□□□□□ -1
PCF11-202ENST00000528336 RASGRF1Q13972 1273 aa8.8□□□□□ -1
PCF11-202ENST00000528336 BMS1Q14692 1282 aaKnown RBP8.8□□□□□ -1
PCF11-202ENST00000528336 MTERF2Q49AM1 385 aa8.8□□□□□ -1
PCF11-202ENST00000528336 XP32Q5T750 250 aa8.8□□□□□ -1
PCF11-202ENST00000528336 SPATC1Q76KD6 591 aa8.8□□□□□ -1
PCF11-202ENST00000528336 ST13P5Q8NFI4 369 aaPredicted RBP8.8□□□□□ -1
PCF11-202ENST00000528336 MAP6Q96JE9 813 aa8.8□□□□□ -1
PCF11-202ENST00000528336 C19orf44Q9H6X5 657 aa8.8□□□□□ -1
PCF11-202ENST00000528336 ZSWIM4Q9H7M6 989 aa8.8□□□□□ -1
PCF11-202ENST00000528336 ERVK13-1Q9NX77 482 aa8.8□□□□□ -1
PCF11-202ENST00000528336 A0A1W2PQU0 124 aa8.79□□□□□ -1
PCF11-202ENST00000528336 RAC2P15153 192 aa8.79□□□□□ -1
PCF11-202ENST00000528336 SEPHS1P49903 392 aa8.79□□□□□ -1
PCF11-202ENST00000528336 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
PCF11-202ENST00000528336 RASA3Q14644 834 aa8.79□□□□□ -1
PCF11-202ENST00000528336 SLC14A2Q15849 920 aa8.79□□□□□ -1
PCF11-202ENST00000528336 CCDC144BQ3MJ40 725 aa8.79□□□□□ -1
PCF11-202ENST00000528336 OXR1Q8N573 874 aa8.79□□□□□ -1
PCF11-202ENST00000528336 PDZD8Q8NEN9 1154 aa8.79□□□□□ -1
PCF11-202ENST00000528336 HHIPL1Q96JK4 782 aa8.79□□□□□ -1
PCF11-202ENST00000528336 FCRL2Q96LA5 508 aaPredicted RBP8.79□□□□□ -1
PCF11-202ENST00000528336 IQCA1LA6NCM1 817 aa8.78□□□□□ -1
PCF11-202ENST00000528336 AFMP43652 599 aa8.78□□□□□ -1
PCF11-202ENST00000528336 PPP2R2AP63151 447 aa8.78□□□□□ -1
PCF11-202ENST00000528336 SF1Q15637 639 aaKnown RBP8.78□□□□□ -1
PCF11-202ENST00000528336 FYB2Q5VWT5 728 aa8.78□□□□□ -1
PCF11-202ENST00000528336 CEP128Q6ZU80 1094 aa8.78□□□□□ -1
PCF11-202ENST00000528336 DPH6Q7L8W6 267 aa8.78□□□□□ -1
PCF11-202ENST00000528336 ATG4DQ86TL0 474 aaPredicted RBP8.78□□□□□ -1
PCF11-202ENST00000528336 TMEM52Q8NDY8 209 aa8.78□□□□□ -1
PCF11-202ENST00000528336 MYLIPQ8WY64 445 aa8.78□□□□□ -1
PCF11-202ENST00000528336 MKL1Q969V6 931 aa8.78□□□□□ -1
PCF11-202ENST00000528336 PTCHD1Q96NR3 888 aa8.78□□□□□ -1
PCF11-202ENST00000528336 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
PCF11-202ENST00000528336 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
PCF11-202ENST00000528336 BACE2Q9Y5Z0 518 aa8.78□□□□□ -1
PCF11-202ENST00000528336 FGF10O15520 208 aaPredicted RBP8.77□□□□□ -1.01
PCF11-202ENST00000528336 ECI1P42126 302 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 GRIA2P42262 883 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 KCNJ6P48051 423 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 SSRP1Q08945 709 aaKnown RBP8.77□□□□□ -1.01
PCF11-202ENST00000528336 SCRN1Q12765 414 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 RCSD1Q6JBY9 416 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 SPPL2CQ8IUH8 684 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 ANKS4BQ8N8V4 417 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 FLAD1Q8NFF5 587 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 NKX2-4Q9H2Z4 354 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 CYP26B1Q9NR63 512 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 TNFRSF10DQ9UBN6 386 aa8.77□□□□□ -1.01
PCF11-202ENST00000528336 CDK11AQ9UQ88 783 aaPredicted RBP8.77□□□□□ -1.01
PCF11-202ENST00000528336 FITM1A5D6W6 292 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 FADS2P1A8MWK0 482 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 BIN1O00499 593 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
PCF11-202ENST00000528336 HPXP02790 462 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 SNRPB2P08579 225 aaKnown RBP8.76□□□□□ -1.01
PCF11-202ENST00000528336 TAL1P17542 331 aaPredicted RBP8.76□□□□□ -1.01
PCF11-202ENST00000528336 KIR2DL1P43626 348 aaPredicted RBP8.76□□□□□ -1.01
PCF11-202ENST00000528336 KIR2DL2P43627 348 aaPredicted RBP8.76□□□□□ -1.01
PCF11-202ENST00000528336 RTP1P59025 263 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 CHRNEQ04844 493 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 HSP90AA2PQ14568 343 aaPredicted RBP8.76□□□□□ -1.01
PCF11-202ENST00000528336 TIGD5Q53EQ6 642 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 EEF1DP3Q658K8 133 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 ABHD4Q8TB40 342 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 SGSM3Q96HU1 749 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 KIRREL1Q96J84 757 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 SPATA9Q9BWV2 254 aa8.76□□□□□ -1.01
PCF11-202ENST00000528336 JAMLQ86YT9 394 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms