RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNF467Q7Z7K2 595 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 PAWRQ96IZ0 340 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 TINF2Q9BSI4 451 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 RANBP17Q9H2T7 1088 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 DDX20Q9UHI6 824 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 MTMR7Q9Y216 660 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 SEPT4O43236 478 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 CNGA1P29973 690 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 GPATCH4Q5T3I0 446 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 SYDE2Q5VT97 1194 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 TTBK2Q6IQ55 1244 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 MAMDC4Q6UXC1 1216 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 ANKRD35Q8N283 1001 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 PNMA1Q8ND90 353 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 TRPV1Q8NER1 839 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 AGBL1Q96MI9 1066 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 UBAC1Q9BSL1 405 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 ACAD9Q9H845 621 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 KAT14Q9H8E8 782 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 GPCPD1Q9NPB8 672 aa14.21□□□□□ -0.13
TRAPPC4-209ENST00000528230 TNKSO95271 1327 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 ICAM1P05362 532 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 NEFLP07196 543 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 SLC16A2P36021 539 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 DPF3Q92784 378 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 TRERF1Q96PN7 1200 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 RNF146Q9NTX7 359 aa14.2□□□□□ -0.14
TRAPPC4-209ENST00000528230 FRMPD2Q68DX3 1309 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 SYNGAP1Q96PV0 1343 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 ALAS1P13196 640 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 SEC23AQ15436 765 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 CCDC174Q6PII3 467 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 NCOA7Q8NI08 942 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 DIS3LQ8TF46 1054 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 C11orf49Q9H6J7 331 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 CCPG1Q9ULG6 757 aa14.19□□□□□ -0.14
TRAPPC4-209ENST00000528230 PFASO15067 1338 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 E7EWF7 191 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 SNAP25P60880 206 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 ASPRV1Q53RT3 343 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 PRAMEF19Q5SWL8 479 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 IFIT1BQ5T764 474 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 CYB5R4Q7L1T6 521 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 RALYLQ86SE5 291 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 FAM133AQ8N9E0 248 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 ARRDC4Q8NCT1 418 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 LSG1Q9H089 658 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 HOMER2Q9NSB8 354 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 CNPY2Q9Y2B0 182 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 RBM8AQ9Y5S9 174 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 NR2E3Q9Y5X4 410 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 MCM3APO60318 1980 aa14.18□□□□□ -0.14
TRAPPC4-209ENST00000528230 WDR19Q8NEZ3 1342 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 MYH6P13533 1939 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 ALPK3Q96L96 1907 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 MKI67P46013 3256 aaKnown RBP14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 SNAI1O95863 264 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 ZNF865P0CJ78 1059 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 COL6A1P12109 1028 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 SKAP1Q86WV1 359 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 MTA3Q9BTC8 594 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 MAF1Q9H063 256 aa14.17□□□□□ -0.14
TRAPPC4-209ENST00000528230 ERICH2A1L162 156 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 DNM1LO00429 736 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 EVI5O60447 810 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 PARP1P09874 1014 aaKnown RBP14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 GOLGA8HP0CJ92 632 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 SART3Q15020 963 aaKnown RBP14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 NECTIN1Q15223 517 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 STOX1Q6ZVD7 989 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 FGD4Q96M96 766 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 ABHD16BQ9H3Z7 469 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 CYP39A1Q9NYL5 469 aa14.16□□□□□ -0.14
TRAPPC4-209ENST00000528230 LOC102724159A0A0B4J2E5 919 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 ASB14A6NK59 587 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 H0YGN5 161 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 IFIT3O14879 490 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 AKR1A1P14550 325 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 CNTN2Q02246 1040 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 PWP2Q15269 919 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 FAM184BQ9ULE4 1060 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 TAF6LQ9Y6J9 622 aa14.15□□□□□ -0.14
TRAPPC4-209ENST00000528230 LCTP09848 1927 aa14.14□□□□□ -0.15
TRAPPC4-209ENST00000528230 SOWAHBA6NEL2 793 aa14.14□□□□□ -0.15
TRAPPC4-209ENST00000528230 SLC27A2O14975 620 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms