RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 FAM151AQ8WW52 585 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 FERMT2Q96AC1 680 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 MFSD14AQ96MC6 490 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 APBA2Q99767 749 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 PNNQ9H307 717 aaKnown RBP5.04□□□□□ -1.6
CHD7-205ENST00000527825 OSBPL3Q9H4L5 887 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHD7-205ENST00000527825 TMEM39AQ9NV64 488 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 LAS1LQ9Y4W2 734 aaKnown RBP5.04□□□□□ -1.6
CHD7-205ENST00000527825 AFG3L2Q9Y4W6 797 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 CDK5RAP2Q96SN8 1893 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 COL4A4P53420 1690 aaPredicted RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 ANKRD18BA2A2Z9 1011 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 PIK3CDO00329 1044 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 TRAK2O60296 914 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 GLRX3O76003 335 aaKnown RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 KRT37O76014 449 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 DDX58O95786 925 aaKnown RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 PTPRAP18433 802 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 ADCYAP1R1P41586 468 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 RNF144AP50876 292 aaPredicted RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 HDLBPQ00341 1268 aaKnown RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 TLE2Q04725 743 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 NEXNQ0ZGT2 675 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 CHAF1AQ13111 956 aaPredicted RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 NFKBIBQ15653 356 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 MAP7D1Q3KQU3 841 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 TREML2Q5T2D2 321 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 WDR78Q5VTH9 848 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 ZNF385CQ66K41 422 aaPredicted RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 PRICKLE2Q7Z3G6 844 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 CYP2U1Q7Z449 544 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 VPS37DQ86XT2 251 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 ZSCAN29Q8IWY8 852 aaPredicted RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 GJD3Q8N144 294 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 PLPP7Q8NBV4 271 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 SLC44A5Q8NCS7 719 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 GPRC5AQ8NFJ5 357 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 TBC1D22AQ8WUA7 517 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 ZDHHC15Q96MV8 337 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 PRRX2Q99811 253 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.03□□□□□ -1.6
CHD7-205ENST00000527825 CUEDC1Q9NWM3 386 aaPredicted RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 BABAM1Q9NWV8 329 aa5.03□□□□□ -1.6
CHD7-205ENST00000527825 ZNFX1Q9P2E3 1918 aaKnown RBP5.03□□□□□ -1.6
CHD7-205ENST00000527825 UTYO14607 1347 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 A0A1W2PRU2 124 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 DCDC2CA8MYV0 355 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 SNAP23O00161 211 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 MEN1O00255 615 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 KIAA0355O15063 1070 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 DCXO43602 365 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 SLURP2P0DP57 97 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 RHOQP17081 205 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 HIBADHP31937 336 aaKnown RBP5.02□□□□□ -1.61
CHD7-205ENST00000527825 ID4P47928 161 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 GSK3AP49840 483 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 KCNMA1Q12791 1236 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 GLIPR1L2Q4G1C9 344 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 OXLD1Q5BKU9 147 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 TAF7LQ5H9L4 462 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 EPHA10Q5JZY3 1008 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 PSRC1Q6PGN9 363 aaPredicted RBP5.02□□□□□ -1.61
CHD7-205ENST00000527825 PLEKHH3Q7Z736 793 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 FAM9BQ8IZU0 186 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 TMEM199Q8N511 208 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 WHAMMQ8TF30 809 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 FRAT1Q92837 279 aaPredicted RBP5.02□□□□□ -1.61
CHD7-205ENST00000527825 EDC3Q96F86 508 aaKnown RBP5.02□□□□□ -1.61
CHD7-205ENST00000527825 ASCC2Q9H1I8 757 aaPredicted RBP5.02□□□□□ -1.61
CHD7-205ENST00000527825 MORF4L1Q9UBU8 362 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 CHMP3Q9Y3E7 222 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 IVNS1ABPQ9Y6Y0 642 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 SMCHD1A6NHR9 2005 aa5.02□□□□□ -1.61
CHD7-205ENST00000527825 KMT2EQ8IZD2 1858 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 CTNND1O60716 968 aaKnown RBP5.01□□□□□ -1.61
CHD7-205ENST00000527825 TIMP1P01033 207 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 HOXB7P09629 217 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 SKIP12755 728 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 GYG1P46976 350 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 HMGCS2P54868 508 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 SNX17Q15036 470 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 KRT24Q2M2I5 525 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 TMEM240Q5SV17 173 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 C1orf53Q5VUE5 145 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 ANO1Q5XXA6 986 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 UBE3BQ7Z3V4 1068 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 GPR142Q7Z601 462 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 SVOPQ8N4V2 548 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 GLMNQ92990 594 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 PAGR1Q9BTK6 254 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 METTL22Q9BUU2 404 aaPredicted RBP5.01□□□□□ -1.61
CHD7-205ENST00000527825 IRF2BPLQ9H1B7 796 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 ARHGEF10LQ9HCE6 1279 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 CD320Q9NPF0 282 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 TMOD4Q9NZQ9 345 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 ADAMTS8Q9UP79 889 aa5.01□□□□□ -1.61
CHD7-205ENST00000527825 PRRC2BQ5JSZ5 2229 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms