RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
CSDE1-210ENST00000525878 TAB3Q8N5C8 712 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-210ENST00000525878 FBXL21Q9UKT6 434 aa7.44□□□□□ -1.22
CSDE1-210ENST00000525878 C9IYK1 514 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 GSNP06396 782 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 PRKCAP17252 672 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 ARL4AP40617 200 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 LDHDQ86WU2 507 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 IGDCC3Q8IVU1 814 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 DHRS1Q96LJ7 313 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 SPON2Q9BUD6 331 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 CDADC1Q9BWV3 514 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 XYLT2Q9H1B5 865 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
CSDE1-210ENST00000525878 AFF3P51826 1226 aaKnown RBP7.42□□□□□ -1.22
CSDE1-210ENST00000525878 CYP4F8P98187 520 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 FAM129CQ86XR2 697 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 JMJD8Q96S16 334 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 SLC12A9Q9BXP2 914 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
CSDE1-210ENST00000525878 RTEL1Q9NZ71 1219 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 PCDHA5Q9Y5H7 936 aa7.42□□□□□ -1.22
CSDE1-210ENST00000525878 IMPDH2P12268 514 aa7.41□□□□□ -1.22
CSDE1-210ENST00000525878 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
CSDE1-210ENST00000525878 TMEM62Q0P6H9 643 aa7.41□□□□□ -1.22
CSDE1-210ENST00000525878 NUP43Q8NFH3 380 aa7.41□□□□□ -1.22
CSDE1-210ENST00000525878 IMPACTQ9P2X3 320 aa7.41□□□□□ -1.22
CSDE1-210ENST00000525878 FOXD2O60548 495 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-210ENST00000525878 MVKQ03426 396 aa7.4□□□□□ -1.22
CSDE1-210ENST00000525878 RAB3GAP1Q15042 981 aa7.4□□□□□ -1.22
CSDE1-210ENST00000525878 TMC6Q7Z403 805 aa7.4□□□□□ -1.22
CSDE1-210ENST00000525878 SMARCC1Q92922 1105 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-210ENST00000525878 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.22
CSDE1-210ENST00000525878 CNKSR3Q6P9H4 555 aa7.39□□□□□ -1.23
CSDE1-210ENST00000525878 RPTNQ6XPR3 784 aa7.39□□□□□ -1.23
CSDE1-210ENST00000525878 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
CSDE1-210ENST00000525878 CCDC144CPQ8IYA2 1237 aa7.39□□□□□ -1.23
CSDE1-210ENST00000525878 TMEM87AQ8NBN3 555 aa7.39□□□□□ -1.23
CSDE1-210ENST00000525878 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-210ENST00000525878 TM9SF2Q99805 663 aa7.39□□□□□ -1.23
CSDE1-210ENST00000525878 IGFBP6P24592 240 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-210ENST00000525878 NFIXQ14938 502 aa7.38□□□□□ -1.23
CSDE1-210ENST00000525878 CXorf38Q8TB03 319 aa7.38□□□□□ -1.23
CSDE1-210ENST00000525878 DSCC1Q9BVC3 393 aa7.38□□□□□ -1.23
CSDE1-210ENST00000525878 FAM86C2PA6NEL3 165 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 OTOL1A6NHN0 477 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-210ENST00000525878 NUDT19A8MXV4 375 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 H0Y8X5 98 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 MSL3P1P0C860 447 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 ZNF16P17020 682 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-210ENST00000525878 MAPKAPK2P49137 400 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 ZNF445P59923 1031 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 CAP1Q01518 475 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 PLEKHN1Q494U1 663 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-210ENST00000525878 AXDND1Q5T1B0 1012 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-210ENST00000525878 HLA-DQA1Q5Y7H0 255 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 DCAF15Q66K64 600 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 BCL11AQ9H165 835 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 GP6Q9HCN6 339 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
CSDE1-210ENST00000525878 FGF10O15520 208 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-210ENST00000525878 SASH1O94885 1247 aa7.36□□□□□ -1.23
CSDE1-210ENST00000525878 GSTM1P09488 218 aa7.36□□□□□ -1.23
CSDE1-210ENST00000525878 ZNF76P36508 570 aa7.36□□□□□ -1.23
CSDE1-210ENST00000525878 FANCCQ00597 558 aa7.36□□□□□ -1.23
CSDE1-210ENST00000525878 NR1I3Q14994 352 aa7.36□□□□□ -1.23
CSDE1-210ENST00000525878 ZYXQ15942 572 aaKnown RBP7.36□□□□□ -1.23
CSDE1-210ENST00000525878 TDRD10Q5VZ19 366 aaKnown RBP7.36□□□□□ -1.23
CSDE1-210ENST00000525878 LINC01356Q8N9X3 169 aa7.36□□□□□ -1.23
CSDE1-210ENST00000525878 METTL5Q9NRN9 209 aaKnown RBP7.36□□□□□ -1.23
CSDE1-210ENST00000525878 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
CSDE1-210ENST00000525878 BUB1BO60566 1050 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-210ENST00000525878 FBLN1P23142 703 aa7.35□□□□□ -1.23
CSDE1-210ENST00000525878 VMACQ2NL98 169 aa7.35□□□□□ -1.23
CSDE1-210ENST00000525878 CWF19L1Q69YN2 538 aaKnown RBP7.35□□□□□ -1.23
CSDE1-210ENST00000525878 CYP2R1Q6VVX0 501 aa7.35□□□□□ -1.23
CSDE1-210ENST00000525878 USP48Q86UV5 1035 aa7.35□□□□□ -1.23
CSDE1-210ENST00000525878 TP53I13Q8NBR0 393 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-210ENST00000525878 BACH2Q9BYV9 841 aa7.35□□□□□ -1.23
CSDE1-210ENST00000525878 LUC7LQ9NQ29 371 aaKnown RBP7.35□□□□□ -1.23
CSDE1-210ENST00000525878 DBHP09172 617 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 SYN1P17600 705 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 CD247P20963 164 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 GUCY2CP25092 1073 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 NCKAP1LP55160 1127 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 ZNF394Q53GI3 561 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
CSDE1-210ENST00000525878 UNC5AQ6ZN44 842 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 SP8Q8IXZ3 490 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 NAT16Q8N8M0 369 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 NLGN2Q8NFZ4 835 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 FEZF2Q8TBJ5 459 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 BRF1Q92994 677 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 PWWP2AQ96N64 755 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 FCRL3Q96P31 734 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-210ENST00000525878 ZNF451Q9Y4E5 1061 aa7.34□□□□□ -1.23
CSDE1-210ENST00000525878 CYBBP04839 570 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms