RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 BADQ92934 168 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 TRIM43Q96BQ3 446 aaPredicted RBP16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 SYNRGQ9UMZ2 1314 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 MCM3APO60318 1980 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 FGAP02671 866 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 FDX1P10109 184 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 IRX5P78411 483 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 NMIQ13287 307 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ACVR2BQ13705 512 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ALX1Q15699 326 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 MCMDC2Q4G0Z9 681 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 RRP12Q5JTH9 1297 aaKnown RBP16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 PPP4R3BQ5MIZ7 849 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 RCSD1Q6JBY9 416 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 CCDC174Q6PII3 467 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ZNF467Q7Z7K2 595 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ZNF589Q86UQ0 364 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ACAD9Q9H845 621 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 ZNF536O15090 1300 aa16.07■□□□□ 0.16
CNKSR1-210ENST00000525687 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 ADCY6O43306 1168 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 ORC4O43929 436 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 PQBP1O60828 265 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 ALAS1P13196 640 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 SHHQ15465 462 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 MTMR10Q9NXD2 777 aa16.06■□□□□ 0.16
CNKSR1-210ENST00000525687 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 PLA2G6O60733 806 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 CLTBP09497 229 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 ITGB8P26012 769 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 ACLYP53396 1101 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 HAND2P61296 217 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 KCNA10Q16322 511 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 CCDC144BQ3MJ40 725 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 KLHDC9Q8NEP7 349 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 TRERF1Q96PN7 1200 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 TSEN34Q9BSV6 310 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 PRR12Q9ULL5 1215 aa16.05■□□□□ 0.16
CNKSR1-210ENST00000525687 IGHDP01880 384 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 FGRP09769 529 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 C6orf222P0C671 652 aaPredicted RBP16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 NOVP48745 357 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 MUM1L1Q5H9M0 696 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 CCSAPQ6IQ19 270 aaPredicted RBP16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 TTBK2Q6IQ55 1244 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 SLC17A8Q8NDX2 589 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 RWDD1Q9H446 243 aaPredicted RBP16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 DDX49Q9Y6V7 483 aaKnown RBP16.04■□□□□ 0.16
CNKSR1-210ENST00000525687 FRMPD2Q68DX3 1309 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 SLC16A2P36021 539 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 TKFCQ3LXA3 575 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 KATNBL1Q9H079 304 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 CCPG1Q9ULG6 757 aa16.03■□□□□ 0.16
CNKSR1-210ENST00000525687 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 ASGR1P07306 291 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 RAG1P15918 1043 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 PLEKHM2Q8IWE5 1019 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 EXOC6Q8TAG9 804 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 DCAF4Q8WV16 495 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 SPC25Q9HBM1 224 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 GPCPD1Q9NPB8 672 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 TMEM39AQ9NV64 488 aa16.02■□□□□ 0.16
CNKSR1-210ENST00000525687 COL6A3P12111 3177 aa16.02■□□□□ 0.15
CNKSR1-210ENST00000525687 ASTN1O14525 1302 aa16.01■□□□□ 0.15
CNKSR1-210ENST00000525687 ZMYM6O95789 1325 aa16.01■□□□□ 0.15
CNKSR1-210ENST00000525687 DCDC2CA8MYV0 355 aa16.01■□□□□ 0.15
CNKSR1-210ENST00000525687 KIAA0355O15063 1070 aa16.01■□□□□ 0.15
CNKSR1-210ENST00000525687 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
CNKSR1-210ENST00000525687 SDSP20132 328 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms