RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CPA4Q9UI42 421 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 NAP1L2Q9ULW6 460 aaPredicted RBP7.58□□□□□ -1.2
CD44-214ENST00000525211 PARP14Q460N5 1801 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 ZNF536O15090 1300 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 MANSC4A6NHS7 340 aaPredicted RBP7.57□□□□□ -1.2
CD44-214ENST00000525211 CCDC69A6NI79 296 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 GOLGA8AA7E2F4 631 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 GOLGA8BA8MQT2 603 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 KLRF2D3W0D1 207 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 POTEB2H3BUK9 544 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 WDR46O15213 610 aaKnown RBP7.57□□□□□ -1.2
CD44-214ENST00000525211 JAK2O60674 1132 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 TRPA1O75762 1119 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 SLC1A4P43007 532 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP14P54578 494 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 NOGQ13253 232 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 CRHR2Q13324 411 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 TMEM132BQ14DG7 1078 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 RABEP1Q15276 862 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 BTNL9Q6UXG8 535 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 ADGRF4Q8IZF3 695 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 FANCBQ8NB91 859 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 DCAF4Q8WV16 495 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 TBC1D2Q9BYX2 928 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 TANGO6Q9C0B7 1094 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 ARHGAP39Q9C0H5 1083 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 JMJD4Q9H9V9 463 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 RAVER2Q9HCJ3 691 aaKnown RBP7.57□□□□□ -1.2
CD44-214ENST00000525211 GOPCQ9HD26 462 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 GJB4Q9NTQ9 266 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 PRR12Q9ULL5 1215 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 ADAMTS5Q9UNA0 930 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 RIPK3Q9Y572 518 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 SLC12A7Q9Y666 1083 aa7.57□□□□□ -1.2
CD44-214ENST00000525211 CNTNAP5Q8WYK1 1306 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 ERICH2A1L162 156 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 VWA5AO00534 786 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 ZBTB43O43298 467 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 PFKFB2O60825 505 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 FLOT1O75955 427 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 DDAH1O94760 285 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 FDPSP14324 419 aaKnown RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 MAP2K2P36507 400 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 HERVK_113P62684 666 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 TAF1CQ15572 869 aaPredicted RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 PKN1Q16512 942 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 RTN1Q16799 776 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 CCDC178Q5BJE1 867 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 SYDE2Q5VT97 1194 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 CCDC174Q6PII3 467 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 C17orf99Q6UX52 265 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 TMTC3Q6ZXV5 915 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 CATIPQ7Z7H3 387 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 CCDC83Q8IWF9 413 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 TBC1D5Q92609 795 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 LPAR1Q92633 364 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 PHKBQ93100 1093 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 MTMR8Q96EF0 704 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 ZNF274Q96GC6 653 aaPredicted RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 TMX3Q96JJ7 454 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 AGBL1Q96MI9 1066 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 PIGSQ96S52 555 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 PORCNQ9H237 461 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 RIOX1Q9H6W3 641 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 UPF2Q9HAU5 1272 aaKnown RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 WBP1LQ9NX94 342 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 PCDH10Q9P2E7 1040 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 ISY1Q9ULR0 285 aaKnown RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 PCDHGA4Q9Y5G9 962 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
CD44-214ENST00000525211 NID2Q14112 1375 aa7.56□□□□□ -1.2
CD44-214ENST00000525211 COL11A1P12107 1806 aaPredicted RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 OPLAHO14841 1288 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 PARP1P09874 1014 aaKnown RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 BCRP11274 1271 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 METAP2P50579 478 aaKnown RBP eCLIP7.55□□□□□ -1.2
CD44-214ENST00000525211 FGD1P98174 961 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 COG2Q14746 738 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 SART3Q15020 963 aaKnown RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 QRICH1Q2TAL8 776 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 MUM1L1Q5H9M0 696 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 COL13A1Q5TAT6 717 aaPredicted RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 LBX2Q6XYB7 198 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 ANKRD13CQ8N6S4 541 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 JMYQ8N9B5 988 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 NSUN7Q8NE18 718 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms