RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	WDR46	O15213	610 aa	Known RBP	13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	IDH1	O75874	414 aa	Known RBP	13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	NKX3-2	P78367	333 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	BEX3	Q00994	111 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	TAP1	Q03518	808 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	TTLL4	Q14679	1199 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	TMEM179	Q6ZVK1	233 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	CLEC10A	Q8IUN9	316 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	GJD3	Q8N144	294 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	REPS2	Q8NFH8	660 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	RHPN1	Q8TCX5	695 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	ARNTL2	Q8WYA1	636 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	SCLY	Q96I15	445 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	FBXL18	Q96ME1	805 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	TRPV6	Q9H1D0	765 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	IL1RAPL2	Q9NP60	686 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	GRIN2D	O15399	1336 aa		13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.02	□□□□□ -0.33
SORBS3-222	ENST00000524057	WDFY4	Q6ZS81	3184 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	LPXN	O60711	386 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	ARHGEF15	O94989	841 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	GRB10	Q13322	594 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	ITGA7	Q13683	1181 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	CXCL17	Q6UXB2	119 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	FAM178B	Q8IXR5	827 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	DDX11	Q96FC9	970 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	AGBL1	Q96MI9	1066 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	RIOK1	Q9BRS2	568 aa	Known RBP	13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	ABHD16B	Q9H3Z7	469 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	ARHGEF10L	Q9HCE6	1279 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	RIPK3	Q9Y572	518 aa		13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.01	□□□□□ -0.33
SORBS3-222	ENST00000524057	B4GALT4	O60513	344 aa		13	□□□□□ -0.33
SORBS3-222	ENST00000524057	COPB2	P35606	906 aa		13	□□□□□ -0.33
SORBS3-222	ENST00000524057	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13	□□□□□ -0.33
SORBS3-222	ENST00000524057	DCTPP1	Q9H773	170 aa		13	□□□□□ -0.33
SORBS3-222	ENST00000524057	MCM9	Q9NXL9	1143 aa		13	□□□□□ -0.33
SORBS3-222	ENST00000524057	PPP1R9A	Q9ULJ8	1098 aa		13	□□□□□ -0.33
SORBS3-222	ENST00000524057	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	ALAD	P13716	330 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	AKR1B1	P15121	316 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	ICA1	Q05084	483 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	DYNLL2	Q96FJ2	89 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	KATNBL1	Q9H079	304 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	KCNH6	Q9H252	994 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	ANTXR1	Q9H6X2	564 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	SH2D4A	Q9H788	454 aa		12.99	□□□□□ -0.33
SORBS3-222	ENST00000524057	ASTN1	O14525	1302 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	SMARCA5	O60264	1052 aa	Predicted RBP	12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	CABYR	O75952	493 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	CYP2D6	P10635	497 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	OS9	Q13438	667 aa	Predicted RBP	12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	CSPP1	Q1MSJ5	1256 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	SPRED2	Q7Z698	418 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	DEFB128	Q7Z7B8	93 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	EXOC6	Q8TAG9	804 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	PHOSPHO2	Q8TCD6	241 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	FGD4	Q96M96	766 aa		12.98	□□□□□ -0.33
SORBS3-222	ENST00000524057	COL11A1	P12107	1806 aa	Predicted RBP	12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	EEF2	P13639	858 aa	Known RBP	12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	SSTR3	P32745	418 aa	Predicted RBP	12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	PSMC6	P62333	389 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	TNFAIP2	Q03169	654 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	SNRNP48	Q6IEG0	339 aa	Known RBP	12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	ARMCX2	Q7L311	632 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	AACS	Q86V21	672 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	TEX13B	Q9BXU2	312 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	SEZ6L	Q9BYH1	1024 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	LMCD1	Q9NZU5	365 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	SWAP70	Q9UH65	585 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	PARP14	Q460N5	1801 aa		12.97	□□□□□ -0.33
SORBS3-222	ENST00000524057	MAGEB6P1	A0A0J9YX57	407 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	POTEB3	A0JP26	581 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	KIF28P	B7ZC32	967 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	PFKM	P08237	780 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	IL9	P15248	144 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	PTGS1	P23219	599 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	SLC4A3	P48751	1232 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	LEXM	Q3ZCV2	418 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	FAM83B	Q5T0W9	1011 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	POTEB	Q6S5H4	581 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	NOL8	Q76FK4	1167 aa	Known RBP	12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	HERC6	Q8IVU3	1022 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	CCDC144CP	Q8IYA2	1237 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	ANKS1A	Q92625	1134 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	KIF1BP	Q96EK5	621 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	SLC9A7	Q96T83	725 aa		12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	UBE2Z	Q9H832	354 aa	Predicted RBP	12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	GNE	Q9Y223	722 aa	Known RBP	12.96	□□□□□ -0.33
SORBS3-222	ENST00000524057	DYNC1LI2	O43237	492 aa	Predicted RBP	12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	RAB11FIP3	O75154	756 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	CYP2C9	P11712	490 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	ACTN1	P12814	892 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	FSCN1	Q16658	493 aa	Known RBP	12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	TMED8	Q6PL24	325 aa	Predicted RBP	12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms