RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 CYBAP13498 195 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 ZNF543Q08ER8 600 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 BMP2KLQ5H9B9 411 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 IFIT1BQ5T764 474 aaKnown RBP19.08■□□□□ 0.64
LSM1-205ENST00000523511 NCOA7Q8NI08 942 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 MAP4K1Q92918 833 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 AGBL1Q96MI9 1066 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 HOMER2Q9NSB8 354 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 RNF146Q9NTX7 359 aa19.08■□□□□ 0.64
LSM1-205ENST00000523511 FRMPD2Q68DX3 1309 aaPredicted RBP19.07■□□□□ 0.64
LSM1-205ENST00000523511 SYNGAP1Q96PV0 1343 aa19.07■□□□□ 0.64
LSM1-205ENST00000523511 RANBP17Q9H2T7 1088 aaKnown RBP19.07■□□□□ 0.64
LSM1-205ENST00000523511 TNKSO95271 1327 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 DNAJC25-GNG10A0A024R161 153 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 KBTBD13C9JR72 458 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 SNHG28P0DPA3 235 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 RARBP10826 455 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 SLC16A2P36021 539 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 PTH1RQ03431 593 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 ASPRV1Q53RT3 343 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 TTBK2Q6IQ55 1244 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 MAMDC4Q6UXC1 1216 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 FAM184BQ9ULE4 1060 aa19.06■□□□□ 0.64
LSM1-205ENST00000523511 A0A0G2JMZ2 1700 aa19.05■□□□□ 0.64
LSM1-205ENST00000523511 ASB14A6NK59 587 aa19.05■□□□□ 0.64
LSM1-205ENST00000523511 DNM1LO00429 736 aa19.05■□□□□ 0.64
LSM1-205ENST00000523511 CYP21A2P08686 494 aa19.05■□□□□ 0.64
LSM1-205ENST00000523511 PARP1P09874 1014 aaKnown RBP19.05■□□□□ 0.64
LSM1-205ENST00000523511 AKR1A1P14550 325 aa19.05■□□□□ 0.64
LSM1-205ENST00000523511 ENAHQ8N8S7 591 aaPredicted RBP19.05■□□□□ 0.64
LSM1-205ENST00000523511 MPHOSPH6Q99547 160 aaKnown RBP19.05■□□□□ 0.64
LSM1-205ENST00000523511 IL25Q9H293 177 aa19.05■□□□□ 0.64
LSM1-205ENST00000523511 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
LSM1-205ENST00000523511 ZNF536O15090 1300 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 IFIT3O14879 490 aaKnown RBP19.04■□□□□ 0.64
LSM1-205ENST00000523511 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
LSM1-205ENST00000523511 PRAMEF19Q5SWL8 479 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 RNF180Q86T96 592 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 TRPV1Q8NER1 839 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 ESYT1Q9BSJ8 1104 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 MAF1Q9H063 256 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 ABHD16BQ9H3Z7 469 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 SPC25Q9HBM1 224 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 ADD3Q9UEY8 706 aaKnown RBP19.04■□□□□ 0.64
LSM1-205ENST00000523511 PLXNB2O15031 1838 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 RLFQ13129 1914 aa19.04■□□□□ 0.64
LSM1-205ENST00000523511 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
LSM1-205ENST00000523511 B4DLN1 442 aa19.03■□□□□ 0.64
LSM1-205ENST00000523511 E7EWF7 191 aa19.03■□□□□ 0.64
LSM1-205ENST00000523511 DHX16O60231 1041 aaKnown RBP19.03■□□□□ 0.64
LSM1-205ENST00000523511 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
LSM1-205ENST00000523511 MRPL12P52815 198 aaKnown RBP19.03■□□□□ 0.64
LSM1-205ENST00000523511 SNAP25P60880 206 aa19.03■□□□□ 0.64
LSM1-205ENST00000523511 TRAF1Q13077 416 aa19.03■□□□□ 0.64
LSM1-205ENST00000523511 DIS3LQ8TF46 1054 aaKnown RBP19.03■□□□□ 0.64
LSM1-205ENST00000523511 SENP6Q9GZR1 1112 aaPredicted RBP19.03■□□□□ 0.64
LSM1-205ENST00000523511 ANO2Q9NQ90 1003 aa19.03■□□□□ 0.64
LSM1-205ENST00000523511 RBM8AQ9Y5S9 174 aaKnown RBP19.03■□□□□ 0.64
LSM1-205ENST00000523511 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 H0YGN5 161 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 ACVR2BQ13705 512 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 WTAPQ15007 396 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 TMTC2Q8N394 836 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 MTA3Q9BTC8 594 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 A1CFQ9NQ94 594 aaKnown RBP19.02■□□□□ 0.64
LSM1-205ENST00000523511 XPNPEP3Q9NQH7 507 aa19.02■□□□□ 0.64
LSM1-205ENST00000523511 ZHX1Q9UKY1 873 aaPredicted RBP19.02■□□□□ 0.64
LSM1-205ENST00000523511 WDR19Q8NEZ3 1342 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 LOC102724159A0A0B4J2E5 919 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 GOLGA8HP0CJ92 632 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 PWP2Q15269 919 aaKnown RBP19.01■□□□□ 0.63
LSM1-205ENST00000523511 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 CATIPQ7Z7H3 387 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 FAM133AQ8N9E0 248 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.01■□□□□ 0.63
LSM1-205ENST00000523511 CYP39A1Q9NYL5 469 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 MYH4Q9Y623 1939 aa19.01■□□□□ 0.63
LSM1-205ENST00000523511 CDC45O75419 566 aa19■□□□□ 0.63
LSM1-205ENST00000523511 SNAI1O95863 264 aaPredicted RBP19■□□□□ 0.63
LSM1-205ENST00000523511 ZNF865P0CJ78 1059 aaPredicted RBP19■□□□□ 0.63
LSM1-205ENST00000523511 COL6A1P12109 1028 aa19■□□□□ 0.63
LSM1-205ENST00000523511 MNX1P50219 401 aaPredicted RBP19■□□□□ 0.63
LSM1-205ENST00000523511 GJC2Q5T442 439 aaPredicted RBP19■□□□□ 0.63
LSM1-205ENST00000523511 MCF2L2Q86YR7 1114 aa19■□□□□ 0.63
LSM1-205ENST00000523511 UBA5Q9GZZ9 404 aa19■□□□□ 0.63
LSM1-205ENST00000523511 PTPDC1A2A3K4 754 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 TNRC18O15417 2968 aaPredicted RBP18.99■□□□□ 0.63
LSM1-205ENST00000523511 MCM5P33992 734 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 CNTN2Q02246 1040 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 SEC23AQ15436 765 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 MUM1L1Q5H9M0 696 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 ANO1Q5XXA6 986 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 RNF207Q6ZRF8 634 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 CYB5R4Q7L1T6 521 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 RASGRP2Q7LDG7 609 aa18.99■□□□□ 0.63
LSM1-205ENST00000523511 CCDC144CPQ8IYA2 1237 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms