RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 GINM1Q9NU53 330 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 BARHL2Q9NY43 387 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 FEM1BQ9UK73 627 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 CCPG1Q9ULG6 757 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 NID2Q14112 1375 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 ADAMTS3O15072 1205 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 PPP1R11O60927 126 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-212ENST00000523483 CFBP00751 764 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 FCHSD1Q86WN1 690 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 CCDC194A0A1B0GVG4 234 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 HOXA13P31271 388 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 ZNF784Q8NCA9 323 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-212ENST00000523483 SMC1BQ8NDV3 1235 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 SMCR8Q8TEV9 937 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-212ENST00000523483 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-212ENST00000523483 UIMC1Q96RL1 719 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
SDCBP-212ENST00000523483 CCL15-CCL14A0A0B4J2E2 113 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 STXBP3O00186 592 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 SF3A1Q15459 793 aaKnown RBP10.72□□□□□ -0.69
SDCBP-212ENST00000523483 CCL15Q16663 113 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 FAM160B2Q86V87 743 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 CEP350Q5VT06 3117 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 GJA5P36382 358 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 KRT85P78386 507 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 RESTQ13127 1097 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 BLIDQ8IZY5 108 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 PSTPIP2Q9H939 334 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 TMEM260Q9NX78 707 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 ZBED4O75132 1171 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 CALML3P27482 149 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 ADCY7P51828 1080 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 LDLRAD1Q5T700 205 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 NOSTRINQ8IVI9 506 aa10.72□□□□□ -0.69
SDCBP-212ENST00000523483 ZSCAN16Q9H4T2 348 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-212ENST00000523483 GOLGA6L4A6NEF3 574 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 CYP2C8P10632 490 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 GNA11P29992 359 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 PPIL2Q13356 520 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 COG2Q14746 738 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 NSMFQ6X4W1 530 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 REXO1Q8N1G1 1221 aaKnown RBP10.71□□□□□ -0.69
SDCBP-212ENST00000523483 PHF20Q9BVI0 1012 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 PPP1R9AQ9ULJ8 1098 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 TOMM70O94826 608 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 EARS2Q5JPH6 523 aaKnown RBP10.71□□□□□ -0.69
SDCBP-212ENST00000523483 SPATA32Q96LK8 384 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
SDCBP-212ENST00000523483 UBXN2AP68543 259 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 STK38Q15208 465 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 MAP3K11Q16584 847 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 INF2Q27J81 1249 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 MYSM1Q5VVJ2 828 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 SNRNP48Q6IEG0 339 aaKnown RBP10.71□□□□□ -0.7
SDCBP-212ENST00000523483 CUL5Q93034 780 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 ZFP91Q96JP5 570 aaPredicted RBP10.71□□□□□ -0.7
SDCBP-212ENST00000523483 PCDHA4Q9UN74 947 aa10.71□□□□□ -0.7
SDCBP-212ENST00000523483 MARCKSP29966 332 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 MCM4P33991 863 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 SYNPO2Q9UMS6 1093 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 FKBP1BP68106 108 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 HTRA3P83110 453 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 SAPCD2Q86UD0 394 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 CCAR1Q8IX12 1150 aaKnown RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 TBC1D5Q92609 795 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 P2RX7Q99572 595 aaKnown RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 ATAD5Q96QE3 1844 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 VWA5AO00534 786 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 CXCL11O14625 94 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 PDIA4P13667 645 aaKnown RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 SMARCA1P28370 1054 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 MCM7P33993 719 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 ME1P48163 572 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 ZNF174Q15697 407 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 ZNF396Q96N95 335 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 ASCC2Q9H1I8 757 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-212ENST00000523483 CLIC4Q9Y696 253 aa10.7□□□□□ -0.7
SDCBP-212ENST00000523483 GREB1LQ9C091 1923 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 A0A0G2JLL6 359 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 BTNL9Q6UXG8 535 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 CATSPERGQ6ZRH7 1159 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 FASTKD5Q7L8L6 764 aaKnown RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 BRAPQ7Z569 592 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 PRRT2Q7Z6L0 340 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 HOXC10Q9NYD6 342 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 DOCK1Q14185 1865 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms