RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, human

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EBF1-210	ENST00000523464	SLC3A2	P08195	630 aa	Known RBP	11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	TAL1	P17542	331 aa	Predicted RBP	11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	TKFC	Q3LXA3	575 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	ANKRD35	Q8N283	1001 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	TMEM199	Q8N511	208 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	CHURC1	Q8WUH1	139 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	MTMR4	Q9NYA4	1195 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	TBX21	Q9UL17	535 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	COG6	Q9Y2V7	657 aa		11.22	□□□□□ -0.61
EBF1-210	ENST00000523464	IGKV6D-41	A0A0C4DH26	115 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464		A0A0U1RQG5	324 aa	Predicted RBP	11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	ASB14	A6NK59	587 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	PATL2	C9JE40	543 aa	Known RBP	11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	ARVCF	O00192	962 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	RNF113A	O15541	343 aa	Known RBP	11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	NDUFB10	O96000	172 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	DNAJB2	P25686	324 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	ITGB8	P26012	769 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	PDE4B	Q07343	736 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	RASIP1	Q5U651	963 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	FAM160B2	Q86V87	743 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	MYLIP	Q8WY64	445 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	NACAP1	Q9BZK3	213 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	MTIF3	Q9H2K0	278 aa	Known RBP	11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	CLIP2	Q9UDT6	1046 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464		Q9Y3F1	56 aa		11.21	□□□□□ -0.61
EBF1-210	ENST00000523464	MYO9B	Q13459	2157 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	LOC102724159	A0A0B4J2E5	919 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	MINDY4B	A8MYZ0	360 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	ZEB2	O60315	1214 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	C6orf222	P0C671	652 aa	Predicted RBP	11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	PWP2	Q15269	919 aa	Known RBP	11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	CCDC144B	Q3MJ40	725 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	GNAS	Q5JWF2	1037 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	AKNAD1	Q5T1N1	836 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	TICAM2	Q86XR7	235 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	NEDD1	Q8NHV4	660 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	TIFA	Q96CG3	184 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	GMCL1	Q96IK5	515 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	ZNF576	Q9H609	170 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	RIPK3	Q9Y572	518 aa		11.2	□□□□□ -0.62
EBF1-210	ENST00000523464	PLIN4	Q96Q06	1357 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	ASGR1	P07306	291 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	BMP3	P12645	472 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	TDO2	P48775	406 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	STAT2	P52630	851 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	NUBP1	P53384	320 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	EPHB4	P54760	987 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	RAB30	Q15771	203 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	SLFNL1	Q499Z3	407 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	TJAP1	Q5JTD0	557 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	IQSEC1	Q6DN90	963 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	ARMCX2	Q7L311	632 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	CPXCR1	Q8N123	301 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	SLC43A3	Q8NBI5	491 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	KIFC2	Q96AC6	838 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	VTI1A	Q96AJ9	217 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	GAS2L1	Q99501	681 aa	Predicted RBP	11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	DCTPP1	Q9H773	170 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	ACAD9	Q9H845	621 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	PRDM6	Q9NQX0	595 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	PNMA2	Q9UL42	364 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	MYH4	Q9Y623	1939 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	BDP1	A6H8Y1	2624 aa		11.19	□□□□□ -0.62
EBF1-210	ENST00000523464	VCAN	P13611	3396 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	TTC41P	Q6P2S7	1318 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	SMIM22	K7EJ46	135 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	ERC2	O15083	957 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	GPAA1	O43292	621 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	CD4	P01730	458 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	APP	P05067	770 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	TSPY3	P0CV98	308 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	TSPY8	P0CW00	308 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	TNFAIP2	Q03169	654 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	GRIN2C	Q14957	1233 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	TMEM240	Q5SV17	173 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	FAM126B	Q8IXS8	530 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	CCDC144CP	Q8IYA2	1237 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	FAM133A	Q8N9E0	248 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	STAG1	Q8WVM7	1258 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	OSBP2	Q969R2	916 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	CEP95	Q96GE4	821 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	NUP88	Q99567	741 aa	Predicted RBP	11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	RAVER2	Q9HCJ3	691 aa	Known RBP	11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	IL23A	Q9NPF7	189 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	MSRA	Q9UJ68	235 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	RCAN3	Q9UKA8	241 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	EYS	Q5T1H1	3165 aa		11.18	□□□□□ -0.62
EBF1-210	ENST00000523464	SLFN13	Q68D06	897 aa		11.17	□□□□□ -0.62
EBF1-210	ENST00000523464	RCSD1	Q6JBY9	416 aa		11.17	□□□□□ -0.62
EBF1-210	ENST00000523464	RPUSD2	Q8IZ73	545 aa	Known RBP	11.17	□□□□□ -0.62
EBF1-210	ENST00000523464	IFNL3	Q8IZI9	196 aa		11.17	□□□□□ -0.62
EBF1-210	ENST00000523464	HERVK_113	Q902F9	699 aa		11.17	□□□□□ -0.62
EBF1-210	ENST00000523464	MAF1	Q9H063	256 aa		11.17	□□□□□ -0.62
EBF1-210	ENST00000523464	KATNBL1	Q9H079	304 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms