RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 FBXO40Q9UH90 709 aa27.17■■□□□ 1.94
PVT1-218ENST00000523328 A0A0U1RQG5 324 aaPredicted RBP27.16■■□□□ 1.94
PVT1-218ENST00000523328 CTAGE5O15320 804 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 CSF2RAP15509 400 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 FAM126BQ8IXS8 530 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 KBTBD3Q8NAB2 608 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 CHST13Q8NET6 341 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 CEP95Q96GE4 821 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 PBX4Q9BYU1 374 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 SPC25Q9HBM1 224 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 ECHDC1Q9NTX5 307 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 FEM1BQ9UK73 627 aa27.16■■□□□ 1.94
PVT1-218ENST00000523328 CTDP1Q9Y5B0 961 aaPredicted RBP27.16■■□□□ 1.94
PVT1-218ENST00000523328 PBX2P40425 430 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 OAZ1P54368 228 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 GNASQ5JWF2 1037 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 MIER1Q8N108 512 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 APPBP2Q92624 585 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 CHMP4BQ9H444 224 aaKnown RBP27.15■■□□□ 1.94
PVT1-218ENST00000523328 MTMR4Q9NYA4 1195 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 SYNPO2Q9UMS6 1093 aa27.15■■□□□ 1.94
PVT1-218ENST00000523328 GRXCR1A8MXD5 290 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 PRDM1O75626 825 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 NKX3-2P78367 333 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 TJAP1Q5JTD0 557 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 CCDC144CPQ8IYA2 1237 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 GMCL1P1Q8NEA9 526 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 VTI1AQ96AJ9 217 aa27.14■■□□□ 1.94
PVT1-218ENST00000523328 CHD9Q3L8U1 2897 aa27.13■■□□□ 1.93
PVT1-218ENST00000523328 GPAA1O43292 621 aa27.13■■□□□ 1.93
PVT1-218ENST00000523328 CCDC174Q6PII3 467 aa27.13■■□□□ 1.93
PVT1-218ENST00000523328 ZNF444Q8N0Y2 327 aaPredicted RBP27.13■■□□□ 1.93
PVT1-218ENST00000523328 LRRC47Q8N1G4 583 aaKnown RBP27.13■■□□□ 1.93
PVT1-218ENST00000523328 TMEM199Q8N511 208 aa27.13■■□□□ 1.93
PVT1-218ENST00000523328 PPP1R12CQ9BZL4 782 aa27.13■■□□□ 1.93
PVT1-218ENST00000523328 GBF1Q92538 1859 aa27.13■■□□□ 1.93
PVT1-218ENST00000523328 TTLL1O95922 423 aa27.12■■□□□ 1.93
PVT1-218ENST00000523328 CD4P01730 458 aa27.12■■□□□ 1.93
PVT1-218ENST00000523328 ACRP10323 421 aa27.12■■□□□ 1.93
PVT1-218ENST00000523328 CNTN2Q02246 1040 aa27.12■■□□□ 1.93
PVT1-218ENST00000523328 ZNF365Q70YC5 407 aa27.12■■□□□ 1.93
PVT1-218ENST00000523328 LRRC37A2A6NM11 1700 aa27.12■■□□□ 1.93
PVT1-218ENST00000523328 PLIN4Q96Q06 1357 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 RNF113AO15541 343 aaKnown RBP27.11■■□□□ 1.93
PVT1-218ENST00000523328 TDO2P48775 406 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 PSRC1Q6PGN9 363 aaPredicted RBP27.11■■□□□ 1.93
PVT1-218ENST00000523328 CCDC129Q6ZRS4 1044 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 FAM133AQ8N9E0 248 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 ZNF287Q9HBT7 754 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 HOMER2Q9NSB8 354 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 ASTN1O14525 1302 aa27.11■■□□□ 1.93
PVT1-218ENST00000523328 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.1■■□□□ 1.93
PVT1-218ENST00000523328 M0R2C6 588 aa27.1■■□□□ 1.93
PVT1-218ENST00000523328 TLR3O15455 904 aaKnown RBP27.1■■□□□ 1.93
PVT1-218ENST00000523328 GNAT2P19087 354 aa27.1■■□□□ 1.93
PVT1-218ENST00000523328 BEX3Q00994 111 aa27.1■■□□□ 1.93
PVT1-218ENST00000523328 GAS2L1Q99501 681 aaPredicted RBP27.1■■□□□ 1.93
PVT1-218ENST00000523328 FDX1P10109 184 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 BMP3P12645 472 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 CYP2C18P33260 490 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 TSHZ3Q63HK5 1081 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 SLFN13Q68D06 897 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 SLC43A3Q8NBI5 491 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 NEDD1Q8NHV4 660 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 PRDM12Q9H4Q4 367 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 ACAD9Q9H845 621 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 A1CFQ9NQ94 594 aaKnown RBP27.09■■□□□ 1.93
PVT1-218ENST00000523328 ZNF536O15090 1300 aa27.09■■□□□ 1.93
PVT1-218ENST00000523328 ZFYP08048 801 aaPredicted RBP27.08■■□□□ 1.93
PVT1-218ENST00000523328 TNFAIP2Q03169 654 aa27.08■■□□□ 1.93
PVT1-218ENST00000523328 IL23AQ9NPF7 189 aa27.08■■□□□ 1.93
PVT1-218ENST00000523328 GNEQ9Y223 722 aaKnown RBP27.08■■□□□ 1.93
PVT1-218ENST00000523328 SOWAHBA6NEL2 793 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 PATL2C9JE40 543 aaKnown RBP27.07■■□□□ 1.92
PVT1-218ENST00000523328 TMEM232C9JQI7 657 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 APPP05067 770 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 AKNAD1Q5T1N1 836 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 CXCL17Q6UXB2 119 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 IFNL3Q8IZI9 196 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 HERVK_113Q902F9 699 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 AGBL1Q96MI9 1066 aa27.07■■□□□ 1.92
PVT1-218ENST00000523328 CXXC1Q9P0U4 656 aaPredicted RBP27.07■■□□□ 1.92
PVT1-218ENST00000523328 LCTP09848 1927 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 TSPY3P0CV98 308 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 TSPY8P0CW00 308 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 STAT2P52630 851 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 C20orf194Q5TEA3 1177 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 PPM1EQ8WY54 764 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 RNF146Q9NTX7 359 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 UMODL1Q5DID0 1318 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 CHD7Q9P2D1 2997 aa27.06■■□□□ 1.92
PVT1-218ENST00000523328 TNFRSF10AO00220 468 aa27.05■■□□□ 1.92
PVT1-218ENST00000523328 ADGRE1Q14246 886 aa27.05■■□□□ 1.92
PVT1-218ENST00000523328 TLK2Q86UE8 772 aa27.05■■□□□ 1.92
PVT1-218ENST00000523328 GRIN2DO15399 1336 aa27.05■■□□□ 1.92
PVT1-218ENST00000523328 ASB14A6NK59 587 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 CABYRO75952 493 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 PTGS1P23219 599 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 NOL8Q76FK4 1167 aaKnown RBP27.04■■□□□ 1.92
PVT1-218ENST00000523328 FAM160B2Q86V87 743 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms