RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 BTNL9Q6UXG8 535 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 CLIC6Q96NY7 704 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 BIN2Q9UBW5 565 aaPredicted RBP17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 ZNF445P59923 1031 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 AXDND1Q5T1B0 1012 aaPredicted RBP17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 CCDC73Q6ZRK6 1079 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 GAS2L3Q86XJ1 694 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 MRPS27Q92552 414 aaKnown RBP17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 TMEM260Q9NX78 707 aa17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.67■□□□□ 0.42
CTNNA1-236ENST00000522792 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 A0A1W2PQ27 194 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 A0A1W2PQ64 194 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 A0A1W2PQD8 194 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 TAL1P17542 331 aaPredicted RBP17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 CAMK4Q16566 473 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 JAKMIP3Q5VZ66 844 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 PPP1R18Q6NYC8 613 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 USP50Q70EL3 339 aaPredicted RBP17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 KRT26Q7Z3Y9 468 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 KIFC2Q96AC6 838 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 KLRG1Q96E93 195 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 PICK1Q9NRD5 415 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 CEP131Q9UPN4 1083 aa17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 ZC3H4Q9UPT8 1303 aaKnown RBP17.66■□□□□ 0.42
CTNNA1-236ENST00000522792 MTMR2Q13614 643 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 INF2Q27J81 1249 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 USH1GQ495M9 461 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 EAPPQ56P03 285 aaPredicted RBP17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 PCDHA1Q9Y5I3 950 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 MCM7P33993 719 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 GRIN1Q05586 938 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 UBE2SQ16763 222 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 KRI1Q8N9T8 703 aaKnown RBP17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 KIAA1683Q9H0B3 1180 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 NUP62CLQ9H1M0 184 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
CTNNA1-236ENST00000522792 PTPRAP18433 802 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 TRAPPC10P48553 1259 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 NDUFA8P51970 172 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 SPP2Q13103 211 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 KRT25Q7Z3Z0 450 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 FBXO11Q86XK2 927 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 AMNQ9BXJ7 453 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 RIC8AQ9NPQ8 531 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 GOLGA6L3A6NEY3 463 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 CUTAO60888 179 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 USP2O75604 605 aaPredicted RBP17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 FAM160A1Q05DH4 1040 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 NONOQ15233 471 aaKnown RBP eCLIP17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 SPECC1Q5M775 1068 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 SHC4Q6S5L8 630 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 CHURC1Q8WUH1 139 aa17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
CTNNA1-236ENST00000522792 CMA1P23946 247 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 CCDC174Q6PII3 467 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 ENGASEQ8NFI3 743 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 CUL5Q93034 780 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 CLSTN2Q9H4D0 955 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 FEM1BQ9UK73 627 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 ZHX2Q9Y6X8 837 aa17.63■□□□□ 0.41
CTNNA1-236ENST00000522792 POTECB2RU33 542 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 PFKFB1P16118 471 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 PTPREP23469 700 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 PTGDRQ13258 359 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 LRSAM1Q6UWE0 723 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 TNMDQ9H2S6 317 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 PSTPIP2Q9H939 334 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 AS3MTQ9HBK9 375 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 EMILIN3Q9NT22 766 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 WDR46O15213 610 aaKnown RBP17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 FMR1NBQ8N0W7 255 aaPredicted RBP17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 ZNF280CQ8ND82 737 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 LPAR1Q92633 364 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 WDR18Q9BV38 432 aa17.62■□□□□ 0.41
CTNNA1-236ENST00000522792 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 IQCA1LA6NCM1 817 aa17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 BMP15O95972 392 aa17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 LETM2Q2VYF4 491 aa17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 TBCKQ8TEA7 893 aa17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 ZC3H15Q8WU90 426 aaKnown RBP17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 RANBP17Q9H2T7 1088 aaKnown RBP17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
CTNNA1-236ENST00000522792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms