RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 LLPHQ9BRT6 129 aaKnown RBP14.28□□□□□ -0.12
PABPC1-219ENST00000522387 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
PABPC1-219ENST00000522387 AGTPBP1Q9UPW5 1226 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 NID2Q14112 1375 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 MYH6P13533 1939 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L15C9J2P7 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L11C9JVI0 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L18D6R9N7 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L22D6RA61 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L19D6RCP7 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L20D6RJB6 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 IGF2BP3O00425 579 aaKnown RBP eCLIP14.27□□□□□ -0.123e-9■■■■■ 37.6
PABPC1-219ENST00000522387 ADAMTS3O15072 1205 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 PRPF3O43395 683 aaKnown RBP14.27□□□□□ -0.12
PABPC1-219ENST00000522387 DEXIO95424 95 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 SLC10A3P09131 477 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 SYT1P21579 422 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 MRE11P49959 708 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 USP17L24Q0WX57 530 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 SMCR8Q8TEV9 937 aaPredicted RBP14.27□□□□□ -0.12
PABPC1-219ENST00000522387 CAPNS2Q96L46 248 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 C12orf42Q96LP6 360 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 PPP1R9AQ9ULJ8 1098 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.12
PABPC1-219ENST00000522387 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.12
PABPC1-219ENST00000522387 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
PABPC1-219ENST00000522387 H3BQV1 296 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 VWA5AO00534 786 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 ZBTB5O15062 677 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 SCG2P13521 617 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
PABPC1-219ENST00000522387 IFFO2Q5TF58 517 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 MCTP1Q6DN14 999 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
PABPC1-219ENST00000522387 DNAH12Q6ZR08 3092 aa14.27□□□□□ -0.13
PABPC1-219ENST00000522387 UNCXA6NJT0 531 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 KIF23Q02241 960 aaPredicted RBP14.26□□□□□ -0.13
PABPC1-219ENST00000522387 C8orf76Q96K31 380 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
PABPC1-219ENST00000522387 CCDC102AQ96A19 550 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 R3HDMLQ9H3Y0 253 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 RIPK3Q9Y572 518 aa14.26□□□□□ -0.13
PABPC1-219ENST00000522387 PNMA6FA0A0J9YX94 578 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 DSG3P32926 999 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 NAPAP54920 295 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 HERVK_113P62684 666 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 TMEM132BQ14DG7 1078 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 BTNL9Q6UXG8 535 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 FAM160B2Q86V87 743 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 TXNRD2Q9NNW7 524 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 HOXC10Q9NYD6 342 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 ALAS1P13196 640 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 ANKRD13CQ8N6S4 541 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 RASGRP4Q8TDF6 673 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 CCPG1Q9ULG6 757 aa14.25□□□□□ -0.13
PABPC1-219ENST00000522387 STX6O43752 255 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
PABPC1-219ENST00000522387 VEGFBP49765 207 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 TRIM29Q14134 588 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 WDR78Q5VTH9 848 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 KRT40Q6A162 431 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 FAM173BQ6P4H8 233 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 FBXO11Q86XK2 927 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 GRPEL1Q9HAV7 217 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 SLC38A10Q9HBR0 1119 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 BTBD7Q9P203 1132 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 ZNF536O15090 1300 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 RASSF10A6NK89 507 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 NLRP5P59047 1200 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 NR5A1Q13285 461 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 Q3C1V9 767 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 SNRNP48Q6IEG0 339 aaKnown RBP14.24□□□□□ -0.13
PABPC1-219ENST00000522387 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 TBC1D5Q92609 795 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 RANBP17Q9H2T7 1088 aaKnown RBP14.24□□□□□ -0.13
PABPC1-219ENST00000522387 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
PABPC1-219ENST00000522387 MKI67P46013 3256 aaKnown RBP14.24□□□□□ -0.13
PABPC1-219ENST00000522387 COL11A1P12107 1806 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-219ENST00000522387 STXBP3O00186 592 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 ZBED4O75132 1171 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 OSBPP22059 807 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 NOM1Q5C9Z4 860 aaKnown RBP14.23□□□□□ -0.13
PABPC1-219ENST00000522387 PGBD1Q96JS3 809 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 AMNQ9BXJ7 453 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 STK36Q9NRP7 1315 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 MANSC4A6NHS7 340 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-219ENST00000522387 BTBD18B2RXH4 712 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 HOXA13P31271 388 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-219ENST00000522387 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-219ENST00000522387 UBE2SQ16763 222 aa14.23□□□□□ -0.13
PABPC1-219ENST00000522387 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms