RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KCNC2Q96PR1 638 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 G6PC3Q9BUM1 346 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 CDADC1Q9BWV3 514 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 TNFRSF10DQ9UBN6 386 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 EFR3BQ9Y2G0 817 aa6.34□□□□□ -1.39
SQLE-204ENST00000520493 NRDCO43847 1150 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 ERCC5P28715 1186 aaPredicted RBP6.33□□□□□ -1.4
SQLE-204ENST00000520493 SOX9P48436 509 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 EIF6P56537 245 aaKnown RBP6.33□□□□□ -1.4
SQLE-204ENST00000520493 HDLBPQ00341 1268 aaKnown RBP6.33□□□□□ -1.4
SQLE-204ENST00000520493 TDRD10Q5VZ19 366 aaKnown RBP6.33□□□□□ -1.4
SQLE-204ENST00000520493 TMEM132EQ6IEE7 984 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 UNC5AQ6ZN44 842 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 CCDC81Q6ZN84 652 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 ZNF605Q86T29 641 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 CXorf38Q8TB03 319 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 RASGRP4Q8TDF6 673 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 DRC1Q96MC2 740 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 EBF1Q9UH73 591 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 TAF6LQ9Y6J9 622 aa6.33□□□□□ -1.4
SQLE-204ENST00000520493 LOC105371045A0A1W2PR82 267 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 OR14I1A6ND48 311 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 C9IYK1 514 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 SUV39H1O43463 412 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 ZNF205O95201 554 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 ARL4AP40617 200 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 RTP1P59025 263 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 TCEAL1Q15170 157 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 SF3A1Q15459 793 aaKnown RBP6.32□□□□□ -1.4
SQLE-204ENST00000520493 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 OLFML2BQ68BL8 750 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 CRTC3Q6UUV7 619 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 NAT16Q8N8M0 369 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 CPLX3Q8WVH0 158 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 SREK1Q8WXA9 508 aaKnown RBP6.32□□□□□ -1.4
SQLE-204ENST00000520493 HHIPL1Q96JK4 782 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 CCSER2Q9H7U1 834 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 CRTAC1Q9NQ79 661 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 RTEL1Q9NZ71 1219 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 MINPP1Q9UNW1 487 aa6.32□□□□□ -1.4
SQLE-204ENST00000520493 SF3B6Q9Y3B4 125 aaKnown RBP6.32□□□□□ -1.4
SQLE-204ENST00000520493 WTIPA6NIX2 430 aaPredicted RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 PEX10O60683 326 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 SEMA7AO75326 666 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 TP53P04637 393 aaPredicted RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 CELA3BP08861 270 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 ITGA4P13612 1032 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 VAV1P15498 845 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 ZXDCQ2QGD7 858 aaPredicted RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 ADGRF1Q5T601 910 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 SIRT2Q8IXJ6 389 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 SRRTQ9BXP5 876 aaKnown RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 PHAXQ9H814 394 aaKnown RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 GP6Q9HCN6 339 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 FAM86C1Q9NVL1 165 aa6.31□□□□□ -1.4
SQLE-204ENST00000520493 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
SQLE-204ENST00000520493 CTSKP43235 329 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 GJA8P48165 433 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 ZYXQ15942 572 aaKnown RBP6.3□□□□□ -1.4
SQLE-204ENST00000520493 NAALADL2Q58DX5 795 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
SQLE-204ENST00000520493 C9orf131Q5VYM1 1079 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 PPFIBP1Q86W92 1011 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 C19orf47Q8N9M1 422 aaKnown RBP6.3□□□□□ -1.4
SQLE-204ENST00000520493 MARCH10Q8NA82 808 aaPredicted RBP6.3□□□□□ -1.4
SQLE-204ENST00000520493 SLC43A3Q8NBI5 491 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 GBP3Q9H0R5 595 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 INPP5FQ9Y2H2 1132 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 GPR55Q9Y2T6 319 aaPredicted RBP6.3□□□□□ -1.4
SQLE-204ENST00000520493 FHOD1Q9Y613 1164 aa6.3□□□□□ -1.4
SQLE-204ENST00000520493 A0A1W2PQ27 194 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 A0A1W2PQ45 241 aaPredicted RBP6.29□□□□□ -1.4
SQLE-204ENST00000520493 A0A1W2PQ64 194 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 A0A1W2PQC6 194 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 A0A1W2PQD8 194 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 A0A1W2PQY0 241 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 SHOXO15266 292 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 GSTM1P09488 218 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 PNLIPP16233 465 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 CD247P20963 164 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 GIPRP48546 466 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 NASPP49321 788 aaPredicted RBP6.29□□□□□ -1.4
SQLE-204ENST00000520493 GNPTABQ3T906 1256 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 FIBCD1Q8N539 461 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 SHISA4Q96DD7 197 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 SEC16BQ96JE7 1060 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 ZNF552Q9H707 407 aaPredicted RBP6.29□□□□□ -1.4
SQLE-204ENST00000520493 AP5S1Q9NUS5 200 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 ERVK13-1Q9NX77 482 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 STRIP2Q9ULQ0 834 aa6.29□□□□□ -1.4
SQLE-204ENST00000520493 NOTOA8MTQ0 251 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms