RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 EAF1Q96JC9 268 aaPredicted RBP3.39□□□□□ -1.87
CCNC-208ENST00000519617 BDH2Q9BUT1 245 aa3.39□□□□□ -1.87
CCNC-208ENST00000519617 EHMT1Q9H9B1 1298 aa3.39□□□□□ -1.87
CCNC-208ENST00000519617 BRMS1Q9HCU9 246 aa3.39□□□□□ -1.87
CCNC-208ENST00000519617 PRR13Q9NZ81 148 aa3.39□□□□□ -1.87
CCNC-208ENST00000519617 MYRFQ9Y2G1 1151 aa3.39□□□□□ -1.87
CCNC-208ENST00000519617 PCDHB14Q9Y5E9 798 aa3.39□□□□□ -1.87
CCNC-208ENST00000519617 PATL2C9JE40 543 aaKnown RBP3.38□□□□□ -1.87
CCNC-208ENST00000519617 TLR3O15455 904 aaKnown RBP3.38□□□□□ -1.87
CCNC-208ENST00000519617 INSRRP14616 1297 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 PFKLP17858 780 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 FBLN1P23142 703 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 MVKQ03426 396 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 TARBP2Q15633 366 aaKnown RBP3.38□□□□□ -1.87
CCNC-208ENST00000519617 PLEKHN1Q494U1 663 aaPredicted RBP3.38□□□□□ -1.87
CCNC-208ENST00000519617 VWA3BQ502W6 1294 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 FBXL19Q6PCT2 694 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 ZC3H14Q6PJT7 736 aaKnown RBP3.38□□□□□ -1.87
CCNC-208ENST00000519617 HHIPL2Q6UWX4 724 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 NLRC3Q7RTR2 1065 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 FAM161BQ96MY7 647 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 JMJD8Q96S16 334 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 CDADC1Q9BWV3 514 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 IMPACTQ9P2X3 320 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 ABCC9O60706 1549 aa3.38□□□□□ -1.87
CCNC-208ENST00000519617 SRGAP3O43295 1099 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 SORBS3O60504 671 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 GSNP06396 782 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 MSL3P1P0C860 447 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 LIMS1P48059 325 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 HTRA3P83110 453 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 AUHQ13825 339 aaKnown RBP3.37□□□□□ -1.87
CCNC-208ENST00000519617 RTP2Q5QGT7 225 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 HLA-DQA1Q5Y7H0 255 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 LIPIQ6XZB0 460 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 ERICH6Q7L0X2 663 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 ERMP1Q7Z2K6 904 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 AEBP1Q8IUX7 1158 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 TMEM192Q8IY95 271 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 FNIP1Q8TF40 1166 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 ZNF512BQ96KM6 892 aaPredicted RBP3.37□□□□□ -1.87
CCNC-208ENST00000519617 AP5S1Q9NUS5 200 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 KBTBD4Q9NVX7 518 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 GFOD1Q9NXC2 390 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 SUPT16HQ9Y5B9 1047 aaKnown RBP3.37□□□□□ -1.87
CCNC-208ENST00000519617 PCDHB12Q9Y5F1 795 aa3.37□□□□□ -1.87
CCNC-208ENST00000519617 MYO15BQ96JP2 1530 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 SH3D21A4FU49 640 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 K7ESM1 405 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 MEIS1O00470 390 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 TNFRSF10CO14798 259 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 CYBBP04839 570 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 ATF2P15336 505 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 NME1P15531 152 aaKnown RBP3.36□□□□□ -1.87
CCNC-208ENST00000519617 EIF4A3P38919 411 aaKnown RBP3.36□□□□□ -1.87
CCNC-208ENST00000519617 CRKP46108 304 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 FOXO4P98177 505 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 ZNF200P98182 395 aaPredicted RBP3.36□□□□□ -1.87
CCNC-208ENST00000519617 PUM1Q14671 1186 aaKnown RBP eCLIP3.36□□□□□ -1.87
CCNC-208ENST00000519617 LRRFIP1Q32MZ4 808 aaKnown RBP3.36□□□□□ -1.87
CCNC-208ENST00000519617 UBXN11Q5T124 520 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 PAQR3Q6TCH7 311 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 FBXO33Q7Z6M2 555 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 SAPCD2Q86UD0 394 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 REXO1Q8N1G1 1221 aaKnown RBP3.36□□□□□ -1.87
CCNC-208ENST00000519617 GPR20Q99678 358 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 TRAIPQ9BWF2 469 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 COPRSQ9NQ92 184 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 SUSD2Q9UGT4 822 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 FBXL21Q9UKT6 434 aa3.36□□□□□ -1.87
CCNC-208ENST00000519617 DCAF1Q9Y4B6 1507 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 NACADO15069 1562 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 MEIS3P2A8K0S8 358 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 PLA2G1BP04054 148 aaKnown RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 DBHP09172 617 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 MAGEA10P43363 369 aaPredicted RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 CLCQ05315 142 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 NT5DC1Q5TFE4 455 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 CRTC3Q6UUV7 619 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 DNAJC14Q6Y2X3 702 aaPredicted RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 SND1Q7KZF4 910 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCNC-208ENST00000519617 LSRQ86X29 649 aaPredicted RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 C7orf61Q8IZ16 206 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 ADGRG2Q8IZP9 1017 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 NLGN2Q8NFZ4 835 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 ZNF296Q8WUU4 475 aaPredicted RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 SLC6A18Q96N87 628 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 SLC12A9Q9BXP2 914 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 SRRTQ9BXP5 876 aaKnown RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 MKRN2Q9H000 416 aaKnown RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 RNF38Q9H0F5 515 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 ANTXR1Q9H6X2 564 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 PDLIM7Q9NR12 457 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 USP40Q9NVE5 1235 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 VTI1BQ9UEU0 232 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 PALD1Q9ULE6 856 aa3.35□□□□□ -1.87
CCNC-208ENST00000519617 ZCCHC6Q5VYS8 1495 aaKnown RBP3.35□□□□□ -1.87
CCNC-208ENST00000519617 RB1CC1Q8TDY2 1594 aa3.34□□□□□ -1.87
CCNC-208ENST00000519617 A0A1B0GTL3 188 aa3.34□□□□□ -1.87
CCNC-208ENST00000519617 A0A1W2PQ27 194 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms