RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 PI4K2BQ8TCG2 481 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 ADAMTS10Q9H324 1103 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 PIF1Q9H611 641 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 EBF1Q9UH73 591 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 ZMYM5Q9UJ78 669 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 TMEM59LQ9UK28 342 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 NOP56O00567 594 aaKnown RBP9.38□□□□□ -0.91
PTPN12-213ENST00000519553 ZGLP1P0C6A0 271 aa9.38□□□□□ -0.91
PTPN12-213ENST00000519553 CEBPAP49715 358 aaPredicted RBP9.38□□□□□ -0.91
PTPN12-213ENST00000519553 AMPD2Q01433 879 aa9.38□□□□□ -0.91
PTPN12-213ENST00000519553 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
PTPN12-213ENST00000519553 BTN2A2Q8WVV5 523 aa9.38□□□□□ -0.91
PTPN12-213ENST00000519553 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
PTPN12-213ENST00000519553 GPR55Q9Y2T6 319 aaPredicted RBP9.38□□□□□ -0.91
PTPN12-213ENST00000519553 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 STXBP3O00186 592 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
PTPN12-213ENST00000519553 RPL10P27635 214 aaKnown RBP9.37□□□□□ -0.91
PTPN12-213ENST00000519553 DPY19L1Q2PZI1 675 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 GTF2IRD2BQ6EKJ0 949 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 CBLL1Q75N03 491 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 WAPLQ7Z5K2 1190 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 GTF2IRD2Q86UP8 949 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 LINC01599Q8WXQ3 324 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 SGSM3Q96HU1 749 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 ERVK13-1Q9NX77 482 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 LRP2BPQ9P2M1 347 aa9.37□□□□□ -0.91
PTPN12-213ENST00000519553 AURKAO14965 403 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 PPP2R2AP63151 447 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 CYP4F3Q08477 520 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 FCRL2Q96LA5 508 aaPredicted RBP9.36□□□□□ -0.91
PTPN12-213ENST00000519553 CDADC1Q9BWV3 514 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 ARHGEF4Q9NR80 690 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 PFDN2Q9UHV9 154 aa9.36□□□□□ -0.91
PTPN12-213ENST00000519553 AGRPO00253 132 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 FGF10O15520 208 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-213ENST00000519553 ADCY3O60266 1144 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 GSTM1P09488 218 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 GRIA2P42262 883 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 DNAJC7Q99615 494 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 NKX2-4Q9H2Z4 354 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 RC3H2Q9HBD1 1191 aaKnown RBP9.35□□□□□ -0.91
PTPN12-213ENST00000519553 ADGRE2Q9UHX3 823 aa9.35□□□□□ -0.91
PTPN12-213ENST00000519553 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 ENDOUP21128 410 aaKnown RBP9.34□□□□□ -0.91
PTPN12-213ENST00000519553 NOP2P46087 812 aaKnown RBP9.34□□□□□ -0.91
PTPN12-213ENST00000519553 IFRD2Q12894 506 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-213ENST00000519553 RCSD1Q6JBY9 416 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 COPS5Q92905 334 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 MAP6Q96JE9 813 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 SPATA9Q9BWV2 254 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 SP110Q9HB58 689 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 CTNND2Q9UQB3 1225 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 BACE2Q9Y5Z0 518 aa9.34□□□□□ -0.91
PTPN12-213ENST00000519553 GDNFP39905 211 aa9.33□□□□□ -0.92
PTPN12-213ENST00000519553 HK2P52789 917 aa9.33□□□□□ -0.92
PTPN12-213ENST00000519553 SSRP1Q08945 709 aaKnown RBP9.33□□□□□ -0.92
PTPN12-213ENST00000519553 SCRN1Q12765 414 aa9.33□□□□□ -0.92
PTPN12-213ENST00000519553 SF1Q15637 639 aaKnown RBP9.33□□□□□ -0.92
PTPN12-213ENST00000519553 LRRC47Q8N1G4 583 aaKnown RBP9.33□□□□□ -0.92
PTPN12-213ENST00000519553 TMEM52Q8NDY8 209 aa9.33□□□□□ -0.92
PTPN12-213ENST00000519553 HHIPL1Q96JK4 782 aa9.33□□□□□ -0.92
PTPN12-213ENST00000519553 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
PTPN12-213ENST00000519553 CCDC120Q96HB5 630 aa9.32□□□□□ -0.92
PTPN12-213ENST00000519553 C2orf71A6NGG8 1288 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 USP2O75604 605 aaPredicted RBP9.31□□□□□ -0.92
PTPN12-213ENST00000519553 SCG5P05408 212 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 GFRA1P56159 465 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 ERVFC1P60507 584 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 DUSP4Q13115 394 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 EEF1DP3Q658K8 133 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 LILRB2Q8N423 598 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 JMYQ8N9B5 988 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 PDZD8Q8NEN9 1154 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 FLAD1Q8NFF5 587 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 C1orf159Q96HA4 380 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 MRFAP1L1Q96HT8 127 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 AARSD1Q9BTE6 412 aaKnown RBP9.31□□□□□ -0.92
PTPN12-213ENST00000519553 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
PTPN12-213ENST00000519553 NOTOA8MTQ0 251 aa9.3□□□□□ -0.92
PTPN12-213ENST00000519553 FADS2P1A8MWK0 482 aa9.3□□□□□ -0.92
PTPN12-213ENST00000519553 HPXP02790 462 aa9.3□□□□□ -0.92
PTPN12-213ENST00000519553 THBDP07204 575 aa9.3□□□□□ -0.92
PTPN12-213ENST00000519553 HSP90AA2PQ14568 343 aaPredicted RBP9.3□□□□□ -0.92
PTPN12-213ENST00000519553 YOD1Q5VVQ6 348 aaPredicted RBP9.3□□□□□ -0.92
PTPN12-213ENST00000519553 SYTL4Q96C24 671 aaPredicted RBP9.3□□□□□ -0.92
PTPN12-213ENST00000519553 PTCHD1Q96NR3 888 aa9.3□□□□□ -0.92
PTPN12-213ENST00000519553 EFEMP2O95967 443 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 SNRPB2P08579 225 aaKnown RBP9.29□□□□□ -0.92
PTPN12-213ENST00000519553 HOXC12P31275 282 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 KIR2DL1P43626 348 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-213ENST00000519553 KIR2DL2P43627 348 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-213ENST00000519553 PRSS53Q2L4Q9 553 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 CYP2R1Q6VVX0 501 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 SLCO6A1Q86UG4 719 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 ANKS4BQ8N8V4 417 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms