RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	RNF146	Q9NTX7	359 aa		28.36	■■■□□ 2.13
CNOT7-204	ENST00000518885	ZSWIM5	Q9P217	1185 aa		28.36	■■■□□ 2.13
CNOT7-204	ENST00000518885	PFAS	O15067	1338 aa		28.36	■■■□□ 2.13
CNOT7-204	ENST00000518885	CCDC174	Q6PII3	467 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	PNMA1	Q8ND90	353 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	ANKS1A	Q92625	1134 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	CCDC136	Q96JN2	1154 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	IL25	Q9H293	177 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	GPCPD1	Q9NPB8	672 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	CCPG1	Q9ULG6	757 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	SYNGAP1	Q96PV0	1343 aa		28.35	■■■□□ 2.13
CNOT7-204	ENST00000518885	DNAJC25-GNG10	A0A024R161	153 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	ICAM1	P05362	532 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	SNHG28	P0DPA3	235 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	ALAS1	P13196	640 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	ZNF543	Q08ER8	600 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	RALYL	Q86SE5	291 aa	Known RBP	28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	TRPV1	Q8NER1	839 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	DIS3L	Q8TF46	1054 aa	Known RBP	28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	AGBL1	Q96MI9	1066 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	TRERF1	Q96PN7	1200 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	RANBP17	Q9H2T7	1088 aa	Known RBP	28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	TNKS	O95271	1327 aa		28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	FRMPD2	Q68DX3	1309 aa	Predicted RBP	28.34	■■■□□ 2.13
CNOT7-204	ENST00000518885	BMP2KL	Q5H9B9	411 aa		28.33	■■■□□ 2.13
CNOT7-204	ENST00000518885	CASC1	Q6TDU7	716 aa		28.33	■■■□□ 2.13
CNOT7-204	ENST00000518885	ZNF536	O15090	1300 aa		28.33	■■■□□ 2.13
CNOT7-204	ENST00000518885	ERICH2	A1L162	156 aa		28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	DNM1L	O00429	736 aa		28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	SLC16A2	P36021	539 aa		28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	SART3	Q15020	963 aa	Known RBP	28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	IFIT1B	Q5T764	474 aa	Known RBP	28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	MAMDC4	Q6UXC1	1216 aa		28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	ENAH	Q8N8S7	591 aa	Predicted RBP	28.32	■■■□□ 2.12
CNOT7-204	ENST00000518885	ZNFX1	Q9P2E3	1918 aa	Known RBP	28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885	KBTBD13	C9JR72	458 aa		28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885		H0YGN5	161 aa		28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885	POTEB2	H3BUK9	544 aa		28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885	RARB	P10826	455 aa		28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885	PTH1R	Q03431	593 aa		28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885	ASPRV1	Q53RT3	343 aa		28.31	■■■□□ 2.12
CNOT7-204	ENST00000518885	PLXNA1	Q9UIW2	1896 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	CYP21A2	P08686	494 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	AKR1A1	P14550	325 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	TTBK2	Q6IQ55	1244 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	RASGRP2	Q7LDG7	609 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	NCOA7	Q8NI08	942 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	MAP4K1	Q92918	833 aa		28.3	■■■□□ 2.12
CNOT7-204	ENST00000518885	MNX1	P50219	401 aa	Predicted RBP	28.29	■■■□□ 2.12
CNOT7-204	ENST00000518885	PRAMEF19	Q5SWL8	479 aa		28.29	■■■□□ 2.12
CNOT7-204	ENST00000518885	A1CF	Q9NQ94	594 aa	Known RBP	28.29	■■■□□ 2.12
CNOT7-204	ENST00000518885	COL6A1	P12109	1028 aa		28.28	■■■□□ 2.12
CNOT7-204	ENST00000518885	SNAP25	P60880	206 aa		28.28	■■■□□ 2.12
CNOT7-204	ENST00000518885	FAM184B	Q9ULE4	1060 aa		28.28	■■■□□ 2.12
CNOT7-204	ENST00000518885	WDR19	Q8NEZ3	1342 aa		28.27	■■■□□ 2.12
CNOT7-204	ENST00000518885	ASB14	A6NK59	587 aa		28.27	■■■□□ 2.12
CNOT7-204	ENST00000518885	PARP1	P09874	1014 aa	Known RBP	28.27	■■■□□ 2.12
CNOT7-204	ENST00000518885	ABHD16B	Q9H3Z7	469 aa		28.27	■■■□□ 2.12
CNOT7-204	ENST00000518885	XPNPEP3	Q9NQH7	507 aa		28.27	■■■□□ 2.12
CNOT7-204	ENST00000518885	RNF180	Q86T96	592 aa		28.26	■■■□□ 2.11
CNOT7-204	ENST00000518885	ESYT1	Q9BSJ8	1104 aa		28.26	■■■□□ 2.11
CNOT7-204	ENST00000518885	ZHX1	Q9UKY1	873 aa	Predicted RBP	28.26	■■■□□ 2.11
CNOT7-204	ENST00000518885	RBM8A	Q9Y5S9	174 aa	Known RBP	28.26	■■■□□ 2.11
CNOT7-204	ENST00000518885	FRMPD3	Q5JV73	1810 aa		28.26	■■■□□ 2.11
CNOT7-204	ENST00000518885		E7EWF7	191 aa		28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	NSMF	Q6X4W1	530 aa		28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	FAM133A	Q8N9E0	248 aa		28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	MPHOSPH6	Q99547	160 aa	Known RBP	28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	CYP39A1	Q9NYL5	469 aa		28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	ADD3	Q9UEY8	706 aa	Known RBP	28.25	■■■□□ 2.11
CNOT7-204	ENST00000518885	IFIT3	O14879	490 aa	Known RBP	28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	MYCN	P04198	464 aa	Predicted RBP	28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	ZNF865	P0CJ78	1059 aa	Predicted RBP	28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	GOLGA8H	P0CJ92	632 aa		28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	ACVR2B	Q13705	512 aa		28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	SENP6	Q9GZR1	1112 aa	Predicted RBP	28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	MAF1	Q9H063	256 aa		28.24	■■■□□ 2.11
CNOT7-204	ENST00000518885	DHX16	O60231	1041 aa	Known RBP	28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	GJC2	Q5T442	439 aa	Predicted RBP	28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	ANO1	Q5XXA6	986 aa		28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	ARMCX2	Q7L311	632 aa		28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	C7orf61	Q8IZ16	206 aa		28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	SPC25	Q9HBM1	224 aa		28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	ANO2	Q9NQ90	1003 aa		28.23	■■■□□ 2.11
CNOT7-204	ENST00000518885	LOC102724159	A0A0B4J2E5	919 aa		28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	SNAI1	O95863	264 aa	Predicted RBP	28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	CNTN2	Q02246	1040 aa		28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	PWP2	Q15269	919 aa	Known RBP	28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	SEC23A	Q15436	765 aa		28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	MUM1L1	Q5H9M0	696 aa		28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	CYB5R4	Q7L1T6	521 aa		28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	CCDC144CP	Q8IYA2	1237 aa		28.22	■■■□□ 2.11
CNOT7-204	ENST00000518885	TAL1	P17542	331 aa	Predicted RBP	28.21	■■■□□ 2.11
CNOT7-204	ENST00000518885	WTAP	Q15007	396 aa		28.21	■■■□□ 2.11
CNOT7-204	ENST00000518885	LRRC41	Q15345	812 aa		28.21	■■■□□ 2.11
CNOT7-204	ENST00000518885	RNF20	Q5VTR2	975 aa		28.21	■■■□□ 2.11
CNOT7-204	ENST00000518885	MTA3	Q9BTC8	594 aa		28.21	■■■□□ 2.11
CNOT7-204	ENST00000518885	PTPDC1	A2A3K4	754 aa		28.2	■■■□□ 2.1
CNOT7-204	ENST00000518885		B4DLN1	442 aa		28.2	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms