RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NEURL1BA8MQ27 555 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 FSCN2O14926 492 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 MAOBP27338 520 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 SLC7A5Q01650 507 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 PTPN11Q06124 597 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 GRM1Q13255 1194 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 CYFIP1Q7L576 1253 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 WAPLQ7Z5K2 1190 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 KCT2Q8NC54 265 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 CNNM2Q9H8M5 875 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 STK26Q9P289 416 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 TRPM3Q9HCF6 1732 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 NHSQ6T4R5 1651 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 CLTCL1P53675 1640 aa6.36□□□□□ -1.39
HMGB1P23-201ENST00000518743 ANKRD30BQ9BXX2 1392 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 WIPF1O43516 503 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 RAG1P15918 1043 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 SQSTM1Q13501 440 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 OVOS1Q6IE37 1185 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 LRFN4Q6PJG9 635 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 UNC5AQ6ZN44 842 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 SMARCC1Q92922 1105 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 ATG4CQ96DT6 458 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 SPATA9Q9BWV2 254 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 PICK1Q9NRD5 415 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 GGA1Q9UJY5 639 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
HMGB1P23-201ENST00000518743 CRB1P82279 1406 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 N4BP2Q86UW6 1770 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 FANCGO15287 622 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 MARCH6O60337 910 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 PGRP06401 933 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 ETF1P62495 437 aaKnown RBP6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 ERVK-24P63145 666 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 NUTM2GQ5VZR2 741 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 RUFY4Q6ZNE9 571 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 NOL8Q76FK4 1167 aaKnown RBP6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 KRT26Q7Z3Y9 468 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 COL23A1Q86Y22 540 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 NUDT8Q8WV74 236 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 NRSN2Q9GZP1 204 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 PRDM6Q9NQX0 595 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 PFDN2Q9UHV9 154 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 KLF15Q9UIH9 416 aa6.34□□□□□ -1.39
HMGB1P23-201ENST00000518743 WNK3Q9BYP7 1800 aa6.34□□□□□ -1.4
HMGB1P23-201ENST00000518743 BCL9O00512 1426 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 E9PCH4 1651 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 ADAMTS7Q9UKP4 1686 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 TRPM1Q7Z4N2 1603 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 WDR33Q9C0J8 1336 aaKnown RBP6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 CEP290O15078 2479 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 SUSD5O60279 629 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 ASMTLO95671 621 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 MASP1P48740 699 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 INPP5AQ14642 412 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 ZC3H12AQ5D1E8 599 aaKnown RBP6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 DTWD1Q8N5C7 304 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 ZBTB38Q8NAP3 1195 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 RAD18Q9NS91 495 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 LEMD3Q9Y2U8 911 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 USP6P35125 1406 aa6.33□□□□□ -1.4
HMGB1P23-201ENST00000518743 SZT2Q5T011 3432 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 PRAMEF27A3QJZ7 478 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 EXOC5O00471 708 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 RFPL3O75679 317 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 EPXP11678 715 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 CDC25BP30305 580 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 GRIK5Q16478 980 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 DEFB115Q30KQ5 88 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 GNPTABQ3T906 1256 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 SLC6A19Q695T7 634 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 KIAA1211LQ6NV74 962 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 C20orf204Q6ZNR8 217 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 ZNF507Q8TCN5 953 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 MFSD3Q96ES6 412 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 USP26Q9BXU7 913 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 ZNF214Q9UL59 606 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 ABT1Q9ULW3 272 aaKnown RBP6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 MYOM3Q5VTT5 1437 aa6.32□□□□□ -1.4
HMGB1P23-201ENST00000518743 A0A0G2JLW4 131 aa6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 ANKRD34BA5PLL1 514 aa6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 APPP05067 770 aa6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 GRK4P32298 578 aa6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 SOX5P35711 763 aa6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 ID3Q02535 119 aa6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 SRSF11Q05519 484 aaKnown RBP6.31□□□□□ -1.4
HMGB1P23-201ENST00000518743 SLC10A6Q3KNW5 377 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms