RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 TSEN34Q9BSV6 310 aaKnown RBP11.37□□□□□ -0.59
SPIDR-202ENST00000517619 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-202ENST00000517619 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 SALL3Q9BXA9 1300 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 VCANP13611 3396 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 MOXD2PA6NHM9 499 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 TSPY2A6NKD2 308 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 KIAA0355O15063 1070 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 FOXP2O15409 715 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 NMT2O60551 498 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 DUSP11O75319 330 aaKnown RBP11.36□□□□□ -0.59
SPIDR-202ENST00000517619 C6orf222P0C671 652 aaPredicted RBP11.36□□□□□ -0.59
SPIDR-202ENST00000517619 RAG1P15918 1043 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 SLC1A4P43007 532 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 IRX5P78411 483 aaPredicted RBP11.36□□□□□ -0.59
SPIDR-202ENST00000517619 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 KCNA10Q16322 511 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 CCDC144CPQ8IYA2 1237 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 KLHDC9Q8NEP7 349 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 ABHD16BQ9H3Z7 469 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
SPIDR-202ENST00000517619 ZNF536O15090 1300 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 DCDC2CA8MYV0 355 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 FDX1P10109 184 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 MCCP23508 829 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 CST5P28325 142 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 EPHB4P54760 987 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 FPGSQ05932 587 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 FAAP100Q0VG06 881 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 VPS53Q5VIR6 699 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 CCSAPQ6IQ19 270 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 KCTD1Q719H9 257 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 FAM160B2Q86V87 743 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 CHURC1Q8WUH1 139 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 RNPC3Q96LT9 517 aaKnown RBP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 GLT1D1Q96MS3 346 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 TOX2Q96NM4 488 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 IL17RBQ9NRM6 502 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 RNF146Q9NTX7 359 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
SPIDR-202ENST00000517619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPIDR-202ENST00000517619 RANBP6O60518 1105 aaKnown RBP11.34□□□□□ -0.59
SPIDR-202ENST00000517619 ASGR1P07306 291 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 ALAS1P13196 640 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 GJA9P57773 515 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 SNAP25P60880 206 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
SPIDR-202ENST00000517619 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 FAM133AQ8N9E0 248 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 PCSK9Q8NBP7 692 aaKnown RBP11.34□□□□□ -0.59
SPIDR-202ENST00000517619 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-202ENST00000517619 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 UPF3AQ9H1J1 476 aaKnown RBP11.34□□□□□ -0.59
SPIDR-202ENST00000517619 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 LAMA4Q16363 1823 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 GBF1Q92538 1859 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
SPIDR-202ENST00000517619 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-202ENST00000517619 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 CCDC96Q2M329 555 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPIDR-202ENST00000517619 VTI1AQ96AJ9 217 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 TTYH1Q9H313 450 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-202ENST00000517619 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 TOMM22Q9NS69 142 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 TBX21Q9UL17 535 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 DDX49Q9Y6V7 483 aaKnown RBP11.33□□□□□ -0.6
SPIDR-202ENST00000517619 ELP1O95163 1332 aa11.33□□□□□ -0.6
SPIDR-202ENST00000517619 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 A0A0U1RQG5 324 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-202ENST00000517619 CTAGE5O15320 804 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 PLA2G6O60733 806 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 TIMP1P01033 207 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 PDE1AP54750 535 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 BEX3Q00994 111 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 TNFAIP2Q03169 654 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 TKFCQ3LXA3 575 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
SPIDR-202ENST00000517619 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
SPIDR-202ENST00000517619 MYLIPQ8WY64 445 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms