RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RTN3O95197 1032 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC175P0C221 793 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 FOSL1P15407 271 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 MX1P20591 662 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CASTP20810 708 aaKnown RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 RXRBP28702 533 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 OAS2P29728 719 aaKnown RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 ARHGAP25P42331 645 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 DEUP1Q05D60 604 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 IFFO1Q0D2I5 559 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 TUBB2AQ13885 445 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 BRD3Q15059 726 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 PLCB4Q15147 1175 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC57Q2TAC2 916 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC178Q5BJE1 867 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 GORABQ5T7V8 394 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 ACBD5Q5T8D3 534 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 WLSQ5T9L3 541 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC181Q5TID7 509 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 TTC19Q6DKK2 380 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 ABI1Q8IZP0 508 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 C2CD4AQ8NCU7 369 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 FBLIM1Q8WUP2 373 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 PLEKHG4BQ96PX9 1271 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 CITED4Q96RK1 184 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 MPHOSPH6Q99547 160 aaKnown RBP5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 TUBB2BQ9BVA1 445 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 RGL1Q9NZL6 768 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 LCMT1Q9UIC8 334 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 DCTN4Q9UJW0 460 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 BLOC1S6Q9UL45 172 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 LEMD3Q9Y2U8 911 aa5.48□□□□□ -1.53
HMGB1P19-201ENST00000517578 FAM95CA0A1B0GW59 222 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 EIF1AYO14602 144 aaKnown RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 LIN7AO14910 233 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 AHCYL1O43865 530 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 OPA1O60313 960 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 E2F6O75461 281 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 KIAA0754O94854 1291 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 IGHDP01880 384 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC192P0DO97 292 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 YBX3P16989 372 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 ADMP35318 185 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 KCNJ6P48051 423 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 RBM5P52756 815 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 CLNS1AP54105 237 aaKnown RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 GSDMDP57764 484 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 LMNB2Q03252 620 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 SCRN1Q12765 414 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 DYNC1I2Q13409 638 aaKnown RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 DRP2Q13474 957 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 DCTN1Q14203 1278 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 IQCB1Q15051 598 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 CPSF6Q16630 551 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 LRRC23Q53EV4 343 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 EXOSC6Q5RKV6 272 aaKnown RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 ANKRD45Q5TZF3 282 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 DUSP27Q5VZP5 1158 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 OTUD6AQ7L8S5 288 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 TMC7Q7Z402 723 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 LUZP1Q86V48 1076 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 IQCA1Q86XH1 822 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 GALNT12Q8IXK2 581 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 AMOTL1Q8IY63 956 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 DRC7Q8IY82 874 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 MAB21L3Q8N8X9 362 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 PRPF38AQ8NAV1 312 aaKnown RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 FAM76AQ8TAV0 307 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 MICAL1Q8TDZ2 1067 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 SMCR8Q8TEV9 937 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 RTF1Q92541 710 aaKnown RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 EZH1Q92800 747 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 JARID2Q92833 1246 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 GTF3C6Q969F1 213 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 PPP1R14BQ96C90 147 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 DMRTB1Q96MA1 342 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 C16orf45Q96MC5 204 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 JPH2Q9BR39 696 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 MTA3Q9BTC8 594 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 OSBPL1AQ9BXW6 950 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 RBCK1Q9BYM8 510 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 L2HGDHQ9H9P8 463 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZNF215Q9UL58 517 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 RIPOR2Q9Y4F9 1068 aa5.47□□□□□ -1.53
HMGB1P19-201ENST00000517578 THOC2Q8NI27 1593 aaKnown RBP5.46□□□□□ -1.53
HMGB1P19-201ENST00000517578 NKTRP30414 1462 aaKnown RBP5.46□□□□□ -1.53
HMGB1P19-201ENST00000517578 GOLGA6L7A0A1B0GV03 622 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 A0A1W2PP55 124 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 IPO5O00410 1097 aaKnown RBP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 KIF3BO15066 747 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 RTN2O75298 545 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 PRNPP04156 253 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 CTSBP07858 339 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 MCM3P25205 808 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 CHMLP26374 656 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 INHBEP58166 350 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 GSTM4Q03013 218 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 SOX4Q06945 474 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 SLFN5Q08AF3 891 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms