RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 ZDHHC15Q96MV8 337 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 RPS6KC1Q96S38 1066 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 HOMER2Q9NSB8 354 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 MEIS1O00470 390 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 PLD2O14939 933 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 DHX15O43143 795 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 SIGLEC6O43699 453 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 GFRA1P56159 465 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 BIRC2Q13490 618 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 OGFOD3Q6PK18 319 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 TMEM145Q8NBT3 493 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 MFSD3Q96ES6 412 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 TRIM39Q9HCM9 518 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 PRDM5Q9NQX1 630 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 PLAAQ9Y263 795 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 CAPN6Q9Y6Q1 641 aa7.54□□□□□ -1.2
CTNNA1-202ENST00000517533 NOP56O00567 594 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 DNAJC8O75937 253 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 ZNF865P0CJ78 1059 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 MYCLP1P12525 358 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 GSK3AP49840 483 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 MAP9Q49MG5 647 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 ZNF765Q7L2R6 523 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 FGD2Q7Z6J4 655 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 HDAC8Q9BY41 377 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 NKX2-4Q9H2Z4 354 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 SLC52A2Q9HAB3 445 aa7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 GEMIN8Q9NWZ8 242 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-202ENST00000517533 ASXL2Q76L83 1435 aa7.52□□□□□ -1.2
CTNNA1-202ENST00000517533 CCDC163A0A0D9SF12 145 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 PPFIA4O75335 1185 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 INSM1Q01101 510 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 NMIQ13287 307 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 RALBP1Q15311 655 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 DPY19L1Q2PZI1 675 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 FNDC3BQ53EP0 1204 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 BRDTQ58F21 947 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 TRIM61Q5EBN2 209 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 TSHZ1Q6ZSZ6 1077 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 KRT26Q7Z3Y9 468 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 UBR7Q8N806 425 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 KREMEN2Q8NCW0 462 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 SCLYQ96I15 445 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 CCDC136Q96JN2 1154 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 CEP89Q96ST8 783 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 MRPL4Q9BYD3 311 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 CHST7Q9NS84 486 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 PRR13Q9NZ81 148 aa7.52□□□□□ -1.21
CTNNA1-202ENST00000517533 GSG1L2A8MUP6 293 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 KCNQ2O43526 872 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 F13BP05160 661 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 SRFP11831 508 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 GRB10Q13322 594 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 C22orf34Q6ZV56 151 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 RNF180Q86T96 592 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 WDR75Q8IWA0 830 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 GSTCDQ8NEC7 633 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 DUSP15Q9H1R2 295 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-202ENST00000517533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 SCG5P05408 212 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 SNRPB2P08579 225 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 CYP7A1P22680 504 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 STAT3P40763 770 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 NKPD1Q17RQ9 610 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 POMZP3Q6PJE2 187 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 BRAPQ7Z569 592 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 ALYREFQ86V81 257 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 FBXL6Q8N531 539 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 FAM181AQ8N9Y4 354 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 TP53INP1Q96A56 240 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 RAXQ9Y2V3 346 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 TRAF6Q9Y4K3 522 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 ST14Q9Y5Y6 855 aa7.5□□□□□ -1.21
CTNNA1-202ENST00000517533 DNAJC25-GNG10A0A024R161 153 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 STXBP3O00186 592 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 IGF2BP3O00425 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 PDE8AO60658 829 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 CENPBP07199 599 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 IFNGR1P15260 489 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 PAX3P23760 479 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 ECI1P42126 302 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 KIR3DL1P43629 444 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 OXCT1P55809 520 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 SCRN1Q12765 414 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 MAP4K2Q12851 820 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 ZNF460Q14592 562 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms