RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TRIM34Q9BYJ4 488 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 TOR3AQ9H497 397 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 NRDE2Q9H7Z3 1164 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 TNFRSF12AQ9NP84 129 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 CEP72Q9P209 647 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 TMEFF2Q9UIK5 374 aaPredicted RBP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZMYM5Q9UJ78 669 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 CBLCQ9ULV8 474 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 FBN3Q75N90 2809 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZNF521Q96K83 1311 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 TESPA1A2RU30 521 aaPredicted RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 ANTXRLA6NF34 631 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 SLITRK5O94991 958 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 PEX11BO96011 259 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 IGKV3-20P01619 116 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 KIR3DL1P43629 444 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 KIR3DS1Q14943 382 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZC3H12AQ5D1E8 599 aaKnown RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 OTUD3Q5T2D3 398 aaPredicted RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 AWAT2Q6E213 333 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 ACRBPQ8NEB7 543 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 LRRC37BQ96QE4 947 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 TRIM56Q9BRZ2 755 aaKnown RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 LRFN3Q9BTN0 628 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 G6PC3Q9BUM1 346 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 GPATCH2Q9NW75 528 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 AURKAIP1Q9NWT8 199 aaPredicted RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 ABI2Q9NYB9 513 aaPredicted RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 HCFC2Q9Y5Z7 792 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 TAF6LQ9Y6J9 622 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 OTOGLQ3ZCN5 2332 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 MDN1Q9NU22 5596 aa0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 COL11A2P13942 1736 aaPredicted RBP0.16□□□□□ -2.38
SNORA40.16-201ENST00000517238 COL4A4P53420 1690 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 TNFRSF13BO14836 293 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 ASGR2P07307 311 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 PTGS2P35354 604 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 THBS2P35442 1172 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 KIR2DL1P43626 348 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 KIR2DL2P43627 348 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 RTP1P59025 263 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 CYP4F8P98187 520 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 HNRNPUQ00839 825 aaKnown RBP eCLIP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 MAP7D1Q3KQU3 841 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 SH3D19Q5HYK7 790 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF746Q6NUN9 644 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 Q6ZSN1 163 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 ARMCX6Q7L4S7 300 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 TSPYL5Q86VY4 417 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 FUKQ8N0W3 1084 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 RNF214Q8ND24 703 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 DDX54Q8TDD1 881 aaKnown RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 NXPE3Q969Y0 559 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 CTAGE1Q96RT6 745 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 LMF1Q96S06 567 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 MIPEPQ99797 713 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 DUSP15Q9H1R2 295 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 EBF3Q9H4W6 596 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 GPRC5BQ9NZH0 403 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 RBPJLQ9UBG7 517 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 PRO0461Q9UI25 63 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 CHIC2Q9UKJ5 165 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 PCDHGC5Q9Y5F6 944 aa0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 POLR2AP24928 1970 aaKnown RBP0.15□□□□□ -2.39
SNORA40.16-201ENST00000517238 A0A1W2PP55 124 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 GRID2IPA4D2P6 1211 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 CGB1A6NKQ9 187 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 PRKCAP17252 672 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 RPL10P27635 214 aaKnown RBP0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 MAPK8P45983 427 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 GTF2IP78347 998 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 TEKQ02763 1124 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 PCDH1Q08174 1060 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 PCOLCEQ15113 449 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 PKN3Q6P5Z2 889 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 GALNT18Q6P9A2 607 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 C18orf65Q6ZTR6 163 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 Q7L0L9 218 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 UBE3DQ7Z6J8 389 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 GSPT2Q8IYD1 628 aaKnown RBP0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 DEPDC4Q8N2C3 294 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 STAG2Q8N3U4 1231 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 PLPP7Q8NBV4 271 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 ALG3Q92685 438 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 EAF1Q96JC9 268 aaPredicted RBP0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 MAP6Q96JE9 813 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZC3H12CQ9C0D7 883 aaKnown RBP0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 CCDC86Q9H6F5 360 aaKnown RBP0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 KMT5AQ9NQR1 393 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 POLR3EQ9NVU0 708 aa0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 CCDC9Q9Y3X0 531 aaKnown RBP0.14□□□□□ -2.39
SNORA40.16-201ENST00000517238 TP73O15350 636 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 C21orf2O43822 256 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 B3GALT2O43825 422 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 BAG4O95429 457 aaKnown RBP0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 HIBADHP31937 336 aaKnown RBP0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 ADCY1Q08828 1119 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 KIF4BQ2VIQ3 1234 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF260Q3ZCT1 412 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms