RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RYR3Q15413 4870 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 TEX51A0A1B0GUA7 166 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 C2CD4DB7Z1M9 353 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 LAMTOR5O43504 91 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 PPP1R37O75864 691 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 SIX3O95343 332 aaPredicted RBP4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 CEACAM1P13688 526 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 HCLS1P14317 486 aaPredicted RBP4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 KCNJ6P48051 423 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 SPDYE2Q495Y8 402 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 EPC2Q52LR7 807 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 HIST2H2BDQ6DRA6 164 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 RAD9AQ99638 391 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 NOC4LQ9BVI4 516 aaKnown RBP4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF341Q9BYN7 854 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 SLC12A5Q9H2X9 1139 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 BCAS3Q9H6U6 928 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 CBX8Q9HC52 389 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 BARX2Q9UMQ3 279 aaPredicted RBP4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 NR2E1Q9Y466 385 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 ATMQ13315 3056 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 CACNA1DQ01668 2161 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 STAB1Q9NY15 2570 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 ATG2AQ2TAZ0 1938 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 F8W031 263 aaPredicted RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 ARVCFO00192 962 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 TERTO14746 1132 aaKnown RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 GJB5O95377 273 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 RARBP10826 455 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 KRT10P13645 584 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 GLULP15104 373 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 TNNI2P48788 182 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 RBM5P52756 815 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 PRAMEF19Q5SWL8 479 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 TTLL5Q6EMB2 1281 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 MIGA2Q7L4E1 593 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 PPP1R42Q7Z4L9 355 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 CCAR1Q8IX12 1150 aaKnown RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 NPLOC4Q8TAT6 608 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 TMC1Q8TDI8 760 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 NELL1Q92832 810 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 AGBL1Q96MI9 1066 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 MPHOSPH9Q99550 1183 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 TSEN34Q9BSV6 310 aaKnown RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 UTP14AQ9BVJ6 771 aaKnown RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 PCGF6Q9BYE7 350 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 PORCNQ9H237 461 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 TDRD3Q9H7E2 651 aaKnown RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 SPATA6Q9NWH7 488 aaPredicted RBP4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 SIT1Q9Y3P8 196 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 ZHX2Q9Y6X8 837 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 ZMYM2Q9UBW7 1377 aa4.37□□□□□ -1.71
SCARNA13-201ENST00000516672 MGAQ8IWI9 3026 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 USP9YO00507 2555 aaPredicted RBP4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 FLNCQ14315 2725 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 A0A0U1RQG5 324 aaPredicted RBP4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 KRBA1A5PL33 1030 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 MOXD2PA6NHM9 499 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 ERVH48-1M5A8F1 160 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 SYNCRIPO60506 623 aaKnown RBP4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 CSPG5O95196 566 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 IGHA2P01877 340 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 ITPKBP27987 946 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 IL12RB1P42701 662 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 FGD1P98174 961 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 DCAF15Q66K64 600 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 RNF43Q68DV7 783 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 TSSK4Q6SA08 328 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 SCUBE3Q8IX30 993 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 PI4K2BQ8TCG2 481 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 VTI1AQ96AJ9 217 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 GLT1D1Q96MS3 346 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 DCBLD2Q96PD2 775 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 TBC1D17Q9HA65 648 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 CWC22Q9HCG8 908 aaKnown RBP4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 TERF2IPQ9NYB0 399 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 USP16Q9Y5T5 823 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 NDUFB9Q9Y6M9 179 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 ELP1O95163 1332 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 CRYBG3Q68DQ2 2970 aa4.36□□□□□ -1.71
SCARNA13-201ENST00000516672 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 CLEC18AA5D8T8 446 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 TRIM75PA6NK02 468 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 SHISA7A6NL88 538 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 RNMTO43148 476 aaKnown RBP4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF76P36508 570 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 WDR5P61964 334 aaKnown RBP4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 DEFB103AP81534 67 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 SKOR1P84550 965 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 NOL9Q5SY16 702 aaKnown RBP4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF787Q6DD87 383 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 CLEC18BQ6UXF7 455 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 GPR155Q7Z3F1 870 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF34Q8IZ26 560 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 CELF5Q8N6W0 485 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms