RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 REC114Q7Z4M0 266 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PRRT2Q7Z6L0 340 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 NLRP10Q86W26 655 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 MAP4K3Q8IVH8 894 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 TMEM151BQ8IW70 566 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 MRPL41Q8IXM3 137 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CMIPQ8IY22 773 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 TMEM87AQ8NBN3 555 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 KREMEN2Q8NCW0 462 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FLAD1Q8NFF5 587 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 NUP43Q8NFH3 380 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 NUDT10Q8NFP7 164 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 SMARCC2Q8TAQ2 1214 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PLEKHO2Q8TD55 490 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 SH3RF2Q8TEC5 729 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ANKRD24Q8TF21 1146 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FRS2Q8WU20 508 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 TMEM40Q8WWA1 233 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 GATAD2BQ8WXI9 593 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 EXTL1Q92935 676 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 RELTQ969Z4 430 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ALKBH8Q96BT7 664 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ASIC4Q96FT7 647 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 NUDT11Q96G61 164 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 INTS4Q96HW7 963 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FAM84AQ96KN4 292 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FBXL18Q96ME1 805 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 C8orf49Q96NF6 230 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 KCNJ15Q99712 375 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 GORASP1Q9BQQ3 440 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 BDH2Q9BUT1 245 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 SSBP3Q9BWW4 388 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CDIP1Q9H305 208 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ZCCHC4Q9H5U6 513 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 AGO3Q9H9G7 860 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 EFCC1Q9HA90 598 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 C11orf16Q9NQ32 467 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FAM13BQ9NYF5 915 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 VTI1BQ9UEU0 232 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 EGFL7Q9UHF1 273 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 TMEM59LQ9UK28 342 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CDC42EP3Q9UKI2 254 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CNOT6Q9ULM6 557 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 GNEQ9Y223 722 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 YBX2Q9Y2T7 364 aaKnown RBP0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 HS3ST3A1Q9Y663 406 aa0.69□□□□□ -2.3
RNU6-1049P-201ENST00000516414 RBM47A0AV96 593 aaKnown RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 C7orf72A4D263 438 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FAM221BA6H8Z2 402 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CCDC85CA6NKD9 419 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 GNAT3A8MTJ3 354 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ACOT7O00154 380 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 IGF2BP3O00425 579 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PIK3R2O00459 728 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 SLC27A2O14975 620 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 N4BP3O15049 544 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 SMAD7O15105 426 aaKnown RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 GPR42O15529 346 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 NOBOXO60393 691 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 B4GALT3O60512 393 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 DIAPH1O60610 1272 aaKnown RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PRPF40AO75400 957 aaKnown RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 STC2O76061 302 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 KCNH1O95259 989 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 BRD1O95696 1058 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 RECKO95980 971 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 THBDP07204 575 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 DBHP09172 617 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ZNF888P0CJ79 500 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 RAG1P15918 1043 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 KRT4P19013 534 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CD247P20963 164 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 IGFBP6P24592 240 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 GSTT1P30711 240 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 L1CAMP32004 1257 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 MC4RP32245 332 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CNR2P34972 360 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 USP5P45974 858 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 AFF3P51826 1226 aaKnown RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ANTXR2P58335 489 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FANCCQ00597 558 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 LMNB2Q03252 620 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PTPN12Q05209 780 aaKnown RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PPP2R3AQ06190 1150 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ADAM9Q13443 819 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 LAPTM5Q13571 262 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PRKD1Q15139 912 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CR1LQ2VPA4 569 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 PLEKHN1Q494U1 663 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 TBC1D10BQ4KMP7 808 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 EAPPQ56P03 285 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CRB2Q5IJ48 1285 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 RPS26P11Q5JNZ5 115 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 FNDC7Q5VTL7 733 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 SLC6A19Q695T7 634 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 BICRALQ6AI39 1079 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 KIAA1211LQ6NV74 962 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 CNKSR3Q6P9H4 555 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 ABHD17CQ6PCB6 329 aa0.68□□□□□ -2.3
RNU6-1049P-201ENST00000516414 LARP4Q71RC2 724 aaKnown RBP eCLIP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms