RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 SSBP05455 408 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 SDHBP21912 280 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 HSF5Q4G112 596 aaPredicted RBP5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 ADGRF1Q5T601 910 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 KIAA1211LQ6NV74 962 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 VHLLQ6RSH7 139 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 KLHL25Q9H0H3 589 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 GBP3Q9H0R5 595 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 SF3B6Q9Y3B4 125 aaKnown RBP5.28□□□□□ -1.56
SNORA40.12-201ENST00000516329 IFNGR1P15260 489 aa5.27□□□□□ -1.57
SNORA40.12-201ENST00000516329 ENDOUP21128 410 aaKnown RBP5.27□□□□□ -1.57
SNORA40.12-201ENST00000516329 SNX17Q15036 470 aa5.27□□□□□ -1.57
SNORA40.12-201ENST00000516329 IRF2BP1Q8IU81 584 aa5.27□□□□□ -1.57
SNORA40.12-201ENST00000516329 PPP1R16BQ96T49 567 aa5.27□□□□□ -1.57
SNORA40.12-201ENST00000516329 WHRNQ9P202 907 aa5.27□□□□□ -1.57
SNORA40.12-201ENST00000516329 STXBP3O00186 592 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 NFIBO00712 420 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 SMAD7O15105 426 aaKnown RBP5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 C1QTNF9P0C862 333 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 RAP1GAPP47736 663 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 CEBPAP49715 358 aaPredicted RBP5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 CASP7P55210 303 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 JAG1P78504 1218 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 GNL2Q13823 731 aaKnown RBP5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 GALNT18Q6P9A2 607 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 SLCO6A1Q86UG4 719 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 VPS37DQ86XT2 251 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 TMEM52Q8NDY8 209 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 NUP43Q8NFH3 380 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 JMJD8Q96S16 334 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 TINF2Q9BSI4 451 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 IMPACTQ9P2X3 320 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 SUGT1Q9Y2Z0 365 aa5.26□□□□□ -1.57
SNORA40.12-201ENST00000516329 OR14I1A6ND48 311 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 B2RBV5 119 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 ETV2O00321 342 aaPredicted RBP5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 TSPAN15O95858 294 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 TMEM253P0C7T8 217 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 PRKCAP17252 672 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 POU4F1Q01851 419 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 DPY19L1Q2PZI1 675 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 LARP1BQ659C4 914 aaKnown RBP5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 JAMLQ86YT9 394 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 FCRL3Q96P31 734 aaPredicted RBP5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 SLC26A8Q96RN1 970 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 MCOLN1Q9GZU1 580 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 ACTR10Q9NZ32 417 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 APEX2Q9UBZ4 518 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 CGGBP1Q9UFW8 167 aaPredicted RBP5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 SUSD2Q9UGT4 822 aa5.25□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A087WZG4 1122 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 MYOCOSA0A1B0GUC4 107 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A1W2PQ27 194 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A1W2PQ45 241 aaPredicted RBP5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A1W2PQ64 194 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A1W2PQD8 194 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 A0A1W2PQY0 241 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 WTIPA6NIX2 430 aaPredicted RBP5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 DBX1A6NMT0 343 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 FGF10O15520 208 aaPredicted RBP5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 VAMP4O75379 141 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 PPM1BO75688 479 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 DNAJA1P31689 397 aaKnown RBP5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 NOP2P46087 812 aaKnown RBP5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 PPP1R14AQ96A00 147 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 CRTAC1Q9NQ79 661 aa5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 DIS3Q9Y2L1 958 aaKnown RBP5.24□□□□□ -1.57
SNORA40.12-201ENST00000516329 ANKRD34BA5PLL1 514 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 TCAF2A6NFQ2 919 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 NPIPB6E9PJ23 425 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 KRT1P04264 644 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 FGRP09769 529 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 PNLIPP16233 465 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 TACR1P25103 407 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 ETFBP38117 255 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 CYP4F8P98187 520 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 AMPD2Q01433 879 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 ARID5AQ03989 594 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 HLA-DQA1Q5Y7H0 255 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 TMEM132EQ6IEE7 984 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 C6orf15Q6UXA7 325 aaPredicted RBP5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 CYP2R1Q6VVX0 501 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 ATG14Q6ZNE5 492 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 BHLHE22Q8NFJ8 381 aaPredicted RBP5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 KCNN1Q92952 543 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 PTCHD1Q96NR3 888 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 SGPP1Q9BX95 441 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 LGR4Q9BXB1 951 aa5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 ZNF552Q9H707 407 aaPredicted RBP5.23□□□□□ -1.57
SNORA40.12-201ENST00000516329 NUDT19A8MXV4 375 aa5.22□□□□□ -1.57
SNORA40.12-201ENST00000516329 E9PSI1 815 aa5.22□□□□□ -1.57
SNORA40.12-201ENST00000516329 AURKAO14965 403 aa5.22□□□□□ -1.57
SNORA40.12-201ENST00000516329 KCNH1O95259 989 aa5.22□□□□□ -1.57
SNORA40.12-201ENST00000516329 MSL3P1P0C860 447 aa5.22□□□□□ -1.57
SNORA40.12-201ENST00000516329 ARL4AP40617 200 aa5.22□□□□□ -1.57
SNORA40.12-201ENST00000516329 FZD5Q13467 585 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms