RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 NOP2P46087 812 aaKnown RBP5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 HLA-DQA1Q5Y7H0 255 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 NAT16Q8N8M0 369 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 SPATA32Q96LK8 384 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 CNTD2Q9H8S5 307 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 DDX41Q9UJV9 622 aaKnown RBP5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 PCDHGB7Q9Y5F8 929 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 SCAMP3O14828 347 aaKnown RBP5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 GSTM1P09488 218 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 SDHBP21912 280 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 MFAP1P55081 439 aaKnown RBP5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 SSPNQ14714 243 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 RAB3GAP1Q15042 981 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 RTP2Q5QGT7 225 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 AXDND1Q5T1B0 1012 aaPredicted RBP5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 TDRD10Q5VZ19 366 aaKnown RBP5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 JAMLQ86YT9 394 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZNF654Q8IZM8 581 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 NUP43Q8NFH3 380 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 CRBNQ96SW2 442 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 SLC12A9Q9BXP2 914 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 SRRTQ9BXP5 876 aaKnown RBP5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 GP6Q9HCN6 339 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 PARD6AQ9NPB6 346 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 PPT2Q9UMR5 302 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 SF3B6Q9Y3B4 125 aaKnown RBP5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 FHOD1Q9Y613 1164 aa5.1□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A087WZG4 1122 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A1W2PQ27 194 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A1W2PQ64 194 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A1W2PQC6 194 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A1W2PQD8 194 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 PI3P19957 117 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 CD247P20963 164 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 VAMP1P23763 118 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 EPHB3P54753 998 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZNF445P59923 1031 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 CBX2Q14781 532 aaPredicted RBP5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 TCEAL1Q15170 157 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 DCAF15Q66K64 600 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 CYP2R1Q6VVX0 501 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 PPFIBP1Q86W92 1011 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 TMEM52Q8NDY8 209 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 MZB1Q8WU39 189 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 JMJD8Q96S16 334 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZCCHC4Q9H5U6 513 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 TNFRSF12AQ9NP84 129 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 KLHL14Q9P2G3 628 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 IMPACTQ9P2X3 320 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZNF214Q9UL59 606 aaPredicted RBP5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 SLC12A7Q9Y666 1083 aa5.09□□□□□ -1.59
RNU4-49P-201ENST00000516080 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 H0Y8X5 98 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 IRS4O14654 1257 aaPredicted RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 TP53P04637 393 aaPredicted RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 ITGA4P13612 1032 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 BMP7P18075 431 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 CEBPAP49715 358 aaPredicted RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 CTSWP56202 376 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 RACK1P63244 317 aaKnown RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 KIR3DS1Q14943 382 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 NR1I3Q14994 352 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 ZYXQ15942 572 aaKnown RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 RUFY4Q6ZNE9 571 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 TMC6Q7Z403 805 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 LSRQ86X29 649 aaPredicted RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 FIBCD1Q8N539 461 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 RGS22Q8NE09 1264 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 BRF1Q92994 677 aa5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 DACT3Q96B18 629 aaPredicted RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 DIS3Q9Y2L1 958 aaKnown RBP5.08□□□□□ -1.6
RNU4-49P-201ENST00000516080 NUDT19A8MXV4 375 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 FGF10O15520 208 aaPredicted RBP5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 HOXA5P20719 270 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 AFF3P51826 1226 aaKnown RBP5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 CDR1P51861 262 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 POU4F1Q01851 419 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 PAK2Q13177 524 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 LDHDQ86WU2 507 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 MARCH10Q8NA82 808 aaPredicted RBP5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 OR6P1Q8NGX9 317 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 GINM1Q9NU53 330 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 ZNF451Q9Y4E5 1061 aa5.07□□□□□ -1.6
RNU4-49P-201ENST00000516080 A0A1W2PQJ5 194 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 PRRG2O14669 202 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 TBC1D8O95759 1140 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 SOX9P48436 509 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 MAPKAPK2P49137 400 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 EIF6P56537 245 aaKnown RBP5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 CORO7P57737 925 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 MVKQ03426 396 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 CNKSR3Q6P9H4 555 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 RPTNQ6XPR3 784 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 C19orf47Q8N9M1 422 aaKnown RBP5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 PANK1Q8TE04 598 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 PTCHD1Q96NR3 888 aa5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 FCRL3Q96P31 734 aaPredicted RBP5.06□□□□□ -1.6
RNU4-49P-201ENST00000516080 KCNC2Q96PR1 638 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms