RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 GSG1LQ6UXU4 331 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 SPEM1Q8N4L4 309 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 OGFOD1Q8N543 542 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 DNAJC5GQ8N7S2 189 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 LINC00482Q8N8I6 264 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 MBD6Q96DN6 1003 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 RSAD1Q9HA92 442 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PICK1Q9NRD5 415 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 RBM19Q9Y4C8 960 aaKnown RBP0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 CSADQ9Y600 493 aa0.61□□□□□ -2.31
SCARNA21.1-201ENST00000515996 A0A1B0GVY2 172 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 NTN3O00634 580 aaPredicted RBP0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 EREGO14944 169 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ZMYND10O75800 440 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 CAPNS1P04632 268 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 BMP8BP34820 402 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ZAP70P43403 619 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 SSBP2P81877 361 aaPredicted RBP0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 HSF5Q4G112 596 aaPredicted RBP0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 LCE3CQ5T5A8 94 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FBXO42Q6P3S6 717 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 GALNT18Q6P9A2 607 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 NPNTQ6UXI9 565 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ERICH6Q7L0X2 663 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 WAPLQ7Z5K2 1190 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 KBTBD2Q8IY47 623 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 KCT2Q8NC54 265 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 HINFPQ9BQA5 517 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 TXLNGQ9NUQ3 528 aa0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ZNF70Q9UC06 446 aaPredicted RBP0.6□□□□□ -2.31
SCARNA21.1-201ENST00000515996 DDX3XO00571 662 aaKnown RBP eCLIP0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FANCGO15287 622 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FOXO3O43524 673 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 BMP15O95972 392 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 IGKV2-30P06310 120 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PMLP29590 882 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 DNAJA1P31689 397 aaKnown RBP0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PRR5P85299 388 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PDE4DQ08499 809 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 IRF5Q13568 498 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 SLBPQ14493 270 aaKnown RBP eCLIP0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 Q6ZSN1 163 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 CDH24Q86UP0 819 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 CCNJLQ8IV13 435 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 VRK3Q8IV63 474 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FOXP4Q8IVH2 680 aaPredicted RBP0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 KRT78Q8N1N4 520 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 MFSD2AQ8NA29 543 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 NUP43Q8NFH3 380 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 KCNB2Q92953 911 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 PMEPA1Q969W9 287 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 EAF1Q96JC9 268 aaPredicted RBP0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ZNF576Q9H609 170 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ZNF703Q9H7S9 590 aaPredicted RBP0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 FBRSQ9HAH7 460 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 CEP72Q9P209 647 aa0.59□□□□□ -2.31
SCARNA21.1-201ENST00000515996 ARHGEF17Q96PE2 2063 aaPredicted RBP0.59□□□□□ -2.32
SCARNA21.1-201ENST00000515996 WTIPA6NIX2 430 aaPredicted RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 B4GALT4O60513 344 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 NTN1O95631 604 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 C1RP00736 705 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CYP1A1P04798 512 aaPredicted RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 BRD2P25440 801 aaKnown RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FOXG1P55316 489 aaPredicted RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RAPGEF1Q13905 1077 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PAQR3Q6TCH7 311 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GPRIN1Q7Z2K8 1008 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PDZD3Q86UT5 571 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 USP48Q86UV5 1035 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 DTWD2Q8NBA8 298 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 NFATC2IPQ8NCF5 419 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GIMAP8Q8ND71 665 aaPredicted RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 XAGE3Q8WTP9 111 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ALG3Q92685 438 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 KREMEN1Q96MU8 473 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ARXQ96QS3 562 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GORASP1Q9BQQ3 440 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 KRTAP4-1Q9BYQ7 146 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 BCAS3Q9H6U6 928 aa0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TMEFF2Q9UIK5 374 aaPredicted RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GPR55Q9Y2T6 319 aaPredicted RBP0.58□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TMEM82A0PJX8 343 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PRSS47A8MTI9 375 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 DCDC2CA8MYV0 355 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZNF185O15231 689 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CNOT4O95628 575 aaKnown RBP0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CYBBP04839 570 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 DBHP09172 617 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SEC13P55735 322 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 NKG7Q16617 165 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 MIDNQ504T8 468 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 C12orf40Q86WS4 652 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FUKQ8N0W3 1084 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ADAMTS19Q8TE59 1207 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 NUDT16Q96DE0 195 aaKnown RBP0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 LRRC37BQ96QE4 947 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TCF12Q99081 682 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SPATA5L1Q9BVQ7 753 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GPRC5BQ9NZH0 403 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ACSL6Q9UKU0 697 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms