RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 V9GY48 417 aaPredicted RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 ADGRA2Q96PE1 1338 aa24.3■■□□□ 1.48
LSM6-207ENST00000515311 PNMA6FA0A0J9YX94 578 aa24.29■■□□□ 1.48
LSM6-207ENST00000515311 PTPDC1A2A3K4 754 aa24.29■■□□□ 1.48
LSM6-207ENST00000515311 ATP2A1O14983 1001 aa24.29■■□□□ 1.48
LSM6-207ENST00000515311 AKAP17AQ02040 695 aaKnown RBP24.29■■□□□ 1.48
LSM6-207ENST00000515311 POTEEQ6S8J3 1075 aa24.29■■□□□ 1.48
LSM6-207ENST00000515311 SLC26A6Q9BXS9 759 aa24.29■■□□□ 1.48
LSM6-207ENST00000515311 RABGAP1Q9Y3P9 1069 aa24.29■■□□□ 1.48
LSM6-207ENST00000515311 CA12O43570 354 aa24.28■■□□□ 1.48
LSM6-207ENST00000515311 HMGN5P82970 282 aaKnown RBP24.28■■□□□ 1.48
LSM6-207ENST00000515311 QRICH1Q2TAL8 776 aa24.28■■□□□ 1.48
LSM6-207ENST00000515311 HOMER1Q86YM7 354 aa24.28■■□□□ 1.48
LSM6-207ENST00000515311 DNAJC5GQ8N7S2 189 aa24.28■■□□□ 1.48
LSM6-207ENST00000515311 CFHR5Q9BXR6 569 aa24.28■■□□□ 1.48
LSM6-207ENST00000515311 ZFYVE28Q9HCC9 887 aa24.28■■□□□ 1.48
LSM6-207ENST00000515311 ZNF214Q9UL59 606 aaPredicted RBP24.28■■□□□ 1.48
LSM6-207ENST00000515311 CTDP1Q9Y5B0 961 aaPredicted RBP24.28■■□□□ 1.48
LSM6-207ENST00000515311 JAK2O60674 1132 aa24.27■■□□□ 1.48
LSM6-207ENST00000515311 DEXIO95424 95 aa24.27■■□□□ 1.48
LSM6-207ENST00000515311 ICAM1P05362 532 aa24.27■■□□□ 1.48
LSM6-207ENST00000515311 TRAF1Q13077 416 aa24.27■■□□□ 1.48
LSM6-207ENST00000515311 RBPJLQ9UBG7 517 aa24.27■■□□□ 1.48
LSM6-207ENST00000515311 ZNF536O15090 1300 aa24.27■■□□□ 1.48
LSM6-207ENST00000515311 SNAP25P60880 206 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 CRHR2Q13324 411 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 TMEM132BQ14DG7 1078 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 PFKFB3Q16875 520 aaPredicted RBP24.26■■□□□ 1.47
LSM6-207ENST00000515311 PIBF1Q8WXW3 757 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 AMNQ9BXJ7 453 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 TEX13BQ9BXU2 312 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 BTBD7Q9P203 1132 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 ORC3Q9UBD5 711 aaPredicted RBP24.26■■□□□ 1.47
LSM6-207ENST00000515311 MORF4L1Q9UBU8 362 aa24.26■■□□□ 1.47
LSM6-207ENST00000515311 hCG_1642624A0A1W2PR95 340 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 hCG_1984214I3L0E3 225 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 TLR2O60603 784 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 CNMDO75829 334 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 SCG2P13521 617 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 FDPSP14324 419 aaKnown RBP24.25■■□□□ 1.47
LSM6-207ENST00000515311 PKN1Q16512 942 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 CCDC174Q6PII3 467 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 FBXO11Q86XK2 927 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 ZNF713Q8N859 430 aaPredicted RBP24.25■■□□□ 1.47
LSM6-207ENST00000515311 WASF1Q92558 559 aa24.25■■□□□ 1.47
LSM6-207ENST00000515311 PPP1R11O60927 126 aaPredicted RBP24.24■■□□□ 1.47
LSM6-207ENST00000515311 PPFIA3O75145 1194 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 MAP2K1Q02750 393 aaPredicted RBP24.24■■□□□ 1.47
LSM6-207ENST00000515311 FAM110CQ1W6H9 321 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 DDX11Q96FC9 970 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 PAGR1Q9BTK6 254 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 RAVER2Q9HCJ3 691 aaKnown RBP24.24■■□□□ 1.47
LSM6-207ENST00000515311 TXNRD2Q9NNW7 524 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 SAGE1Q9NXZ1 904 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 SMC3Q9UQE7 1217 aa24.24■■□□□ 1.47
LSM6-207ENST00000515311 HSP90AA1P07900 732 aaKnown RBP24.23■■□□□ 1.47
LSM6-207ENST00000515311 ERVK-9P63128 1117 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 ERVK-24P63145 666 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 CPXCR1Q8N123 301 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 GPRC5AQ8NFJ5 357 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 SPATC1LQ9H0A9 340 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 RNF186Q9NXI6 227 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 CCPG1Q9ULG6 757 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 KIF3AQ9Y496 699 aa24.23■■□□□ 1.47
LSM6-207ENST00000515311 RBBP6Q7Z6E9 1792 aaKnown RBP24.23■■□□□ 1.47
LSM6-207ENST00000515311 SMCHD1A6NHR9 2005 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 ABCB11O95342 1321 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 BCRP11274 1271 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 COPB2P35606 906 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 STAT3P40763 770 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 TKFCQ3LXA3 575 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 SNRNP48Q6IEG0 339 aaKnown RBP24.22■■□□□ 1.47
LSM6-207ENST00000515311 C17orf99Q6UX52 265 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 HEATR3Q7Z4Q2 680 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 RIOX2Q8IUF8 465 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 FAM177A1Q8N128 213 aaPredicted RBP24.22■■□□□ 1.47
LSM6-207ENST00000515311 ANKRD13CQ8N6S4 541 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 AGBL1Q96MI9 1066 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 BARHL2Q9NY43 387 aa24.22■■□□□ 1.47
LSM6-207ENST00000515311 CEP350Q5VT06 3117 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 DTNBO60941 627 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 CCNA1P78396 465 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 PLS1Q14651 629 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 WWC2Q6AWC2 1192 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 PPP1R18Q6NYC8 613 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 SH3GLB2Q9NR46 395 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 PCDHA1Q9Y5I3 950 aa24.21■■□□□ 1.47
LSM6-207ENST00000515311 STXBP3O00186 592 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 SLC25A27O95847 323 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 GJB2P29033 226 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 USH1GQ495M9 461 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 FAM184AQ8NB25 1140 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 SHCBP1Q8NEM2 672 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 GPKOWQ92917 476 aaPredicted RBP eCLIP24.2■■□□□ 1.46
LSM6-207ENST00000515311 ALG1Q9BT22 464 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 MOV10L1Q9BXT6 1211 aaKnown RBP24.2■■□□□ 1.46
LSM6-207ENST00000515311 CPA4Q9UI42 421 aa24.2■■□□□ 1.46
LSM6-207ENST00000515311 PEX10O60683 326 aa24.19■■□□□ 1.46
LSM6-207ENST00000515311 TRPA1O75762 1119 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms