RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MYOCDQ8IZQ8 938 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 AFAP1L1Q8TED9 768 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 STMN2Q93045 179 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 ATP2A3Q93084 1043 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 ADD3Q9UEY8 706 aaKnown RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 ARHGAP6O43182 974 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 PTPN21Q16825 1174 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 FAM178BQ8IXR5 827 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 CACTINQ8WUQ7 758 aaKnown RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 DMP1Q13316 513 aaPredicted RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 KRT81Q14533 505 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 RPS6KA1Q15418 735 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 C11orf57Q6ZUT1 292 aaPredicted RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 GPIHBP1Q8IV16 184 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 EXOC8Q8IYI6 725 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 KIAA1468Q9P260 1216 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 K7ENM7 598 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 PPARDQ03181 441 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
TRIM41-207ENST00000515223 NEK8Q86SG6 692 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 LRRIQ4A6NIV6 560 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 BBOX1O75936 387 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 ERCC3P19447 782 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 IGBP1P78318 339 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 RPUSD2Q8IZ73 545 aaKnown RBP17.61■□□□□ 0.41
TRIM41-207ENST00000515223 HAUS1Q96CS2 278 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 LRFN2Q9ULH4 789 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 COL4A3BPQ9Y5P4 624 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 PFKFB1P16118 471 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 TRIM31Q9BZY9 425 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 STAP2Q9UGK3 403 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 MAN1A1P33908 653 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 GOLGA8FQ08AF8 430 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 GOLGA8DPQ0D2H9 430 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 CC2D2BQ6DHV5 1058 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 EPSTI1Q96J88 318 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 SWAP70Q9UH65 585 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 SERPINB2P05120 415 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 POLA2Q14181 598 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 BSPRYQ5W0U4 402 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 SCYL2Q6P3W7 929 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 SESTD1Q86VW0 696 aa17.61■□□□□ 0.41
TRIM41-207ENST00000515223 SDR42E1Q8WUS8 393 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 ESYT2A0FGR8 921 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 TYW5A2RUC4 315 aaKnown RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 IL6STP40189 918 aaPredicted RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 LACTBP83111 547 aaPredicted RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 PPP2R5AQ15172 486 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 AOC3Q16853 763 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 HHATQ5VTY9 493 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 FANCBQ8NB91 859 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 AMNQ9BXJ7 453 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 FTOQ9C0B1 505 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 MRFAP1L1Q96HT8 127 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 GDAP1L1Q96MZ0 367 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 TNKSO95271 1327 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 SORBS3O60504 671 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 NDUFA8P51970 172 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 IFRD2Q12894 506 aaPredicted RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 GPATCH4Q5T3I0 446 aaKnown RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 IL17REQ8NFR9 667 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 RSAD2Q8WXG1 361 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 THRAP3Q9Y2W1 955 aaKnown RBP17.6■□□□□ 0.41
TRIM41-207ENST00000515223 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
TRIM41-207ENST00000515223 KDRP35968 1356 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 ADALQ6DHV7 355 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 TDRD7Q8NHU6 1098 aaKnown RBP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 ATP6V0A1Q93050 837 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 ARMCX3Q9UH62 379 aaPredicted RBP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 DDX25Q9UHL0 483 aaKnown RBP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 I3L4J1 428 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 DDAH1O94760 285 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 OR52Z1P0C646 297 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 STAM2O75886 525 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 TECP42680 631 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 SCRN1Q12765 414 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 ARMCX5Q6P1M9 558 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 RETREG2Q8NC44 543 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 STAMQ92783 540 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 PPP1R13BQ96KQ4 1090 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 BLZF1Q9H2G9 400 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 PCDHA7Q9UN72 937 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 RRAGAQ7L523 313 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 ZNF274Q96GC6 653 aaPredicted RBP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 RAB3IPQ96QF0 476 aaPredicted RBP17.59■□□□□ 0.41
TRIM41-207ENST00000515223 KIF2CQ99661 725 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
TRIM41-207ENST00000515223 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms