RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 TRAF1Q13077 416 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 TEX2Q8IWB9 1127 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 TRIM22Q8IYM9 498 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 CFHR5Q9BXR6 569 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 UBA5Q9GZZ9 404 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 FBXO28Q9NVF7 368 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 SMCHD1A6NHR9 2005 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 ZBTB5O15062 677 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 DEXIO95424 95 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 SLC16A2P36021 539 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 GCLCP48506 637 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 HERVK_113P62684 666 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 PARK7Q99497 189 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 P2RX7Q99572 595 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 MAF1Q9H063 256 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 ADGRA2Q96PE1 1338 aa13.87□□□□□ -0.19
PDLIM5-220ENST00000514830 PTPDC1A2A3K4 754 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 PKN1Q16512 942 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 WASF1Q92558 559 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 PHKBQ93100 1093 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 KIFC2Q96AC6 838 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 PIGSQ96S52 555 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 ZIC5Q96T25 663 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 ZNF536O15090 1300 aa13.86□□□□□ -0.19
PDLIM5-220ENST00000514830 AOC2O75106 756 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 ZBED4O75132 1171 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 ICAM1P05362 532 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 SCG2P13521 617 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 AKAP17AQ02040 695 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 ORC3Q9UBD5 711 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 MORF4L1Q9UBU8 362 aa13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 SEC63Q9UGP8 760 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 ZNF214Q9UL59 606 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-220ENST00000514830 JAK2O60674 1132 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 COPB2P35606 906 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 TKFCQ3LXA3 575 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 AMNQ9BXJ7 453 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 MCOLN1Q9GZU1 580 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 RBPJLQ9UBG7 517 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 SMC3Q9UQE7 1217 aa13.84□□□□□ -0.19
PDLIM5-220ENST00000514830 MGAMO43451 1857 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 TLR2O60603 784 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 CNMDO75829 334 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 GHRHRQ02643 423 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 TMEM132BQ14DG7 1078 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 ZFYVE28Q9HCC9 887 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 ABCB11O95342 1321 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 ZNF236Q9UL36 1845 aa13.83□□□□□ -0.2
PDLIM5-220ENST00000514830 ZNFX1Q9P2E3 1918 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 CYP2C8P10632 490 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 BCRP11274 1271 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 GJB2P29033 226 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 TAF1CQ15572 869 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 RIOX2Q8IUF8 465 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 SHCBP1Q8NEM2 672 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 SMCR8Q8TEV9 937 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 BTBD7Q9P203 1132 aa13.82□□□□□ -0.2
PDLIM5-220ENST00000514830 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms