RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	DIRC2	Q96SL1	478 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	FOXP3	Q9BZS1	431 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZSWIM4	Q9H7M6	989 aa		5.06	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	WASH4P	A8MWX3	477 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	RFXAP	O00287	272 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PNLIP	P16233	465 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PDE6B	P35913	854 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NASP	P49321	788 aa	Predicted RBP	5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CEP128	Q6ZU80	1094 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	LSR	Q86X29	649 aa	Predicted RBP	5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PMFBP1	Q8TBY8	1022 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	G6PC3	Q9BUM1	346 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SRRT	Q9BXP5	876 aa	Known RBP	5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SP110	Q9HB58	689 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GFOD1	Q9NXC2	390 aa		5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZNF214	Q9UL59	606 aa	Predicted RBP	5.05	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TRBV23OR9-2	A0A075B6M9	112 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TEX51	A0A1B0GUA7	166 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TMEM82	A0PJX8	343 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	VAV1	P15498	845 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GIPR	P48546	466 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	RTP1	P59025	263 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	POU4F1	Q01851	419 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SERINC3	Q13530	473 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	LRP10	Q7Z4F1	713 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NLRX1	Q86UT6	975 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	NAT16	Q8N8M0	369 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CPLX3	Q8WVH0	158 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CDADC1	Q9BWV3	514 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ANTXR1	Q9H6X2	564 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZNF552	Q9H707	407 aa	Predicted RBP	5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GINM1	Q9NU53	330 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	WHRN	Q9P202	907 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	PPT2	Q9UMR5	302 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	EFR3B	Q9Y2G0	817 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	DIS3	Q9Y2L1	958 aa	Known RBP	5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TBX22	Q9Y458	520 aa		5.04	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A1W2PQ27	194 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A1W2PQ64	194 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A1W2PQC6	194 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267		A0A1W2PQD8	194 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	USP2	O75604	605 aa	Predicted RBP	5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	MPO	P05164	745 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ACR	P10323	421 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZNF143	P52747	638 aa	Predicted RBP	5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CORO7	P57737	925 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ERVFC1	P60507	584 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	HLA-DQA1	Q5Y7H0	255 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CIAPIN1	Q6FI81	312 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TMEM132E	Q6IEE7	984 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SDE2	Q6IQ49	451 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	UNC5A	Q6ZN44	842 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	TMEM151B	Q8IW70	566 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	KCNN1	Q92952	543 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	C19orf44	Q9H6X5	657 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	ZNF408	Q9H9D4	720 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	GP6	Q9HCN6	339 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	CD320	Q9NPF0	282 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	SIRPG	Q9P1W8	387 aa		5.03	□□□□□ -1.6
CALCOCO2-223	ENST00000514267	FADS2P1	A8MWK0	482 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	FKTN	O75072	461 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PPM1B	O75688	479 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TBC1D8	O95759	1140 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CD247	P20963	164 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CDK11B	P21127	795 aa	Known RBP	5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ERVFRD-1	P60508	538 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SLC7A5	Q01650	507 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SNW1	Q13573	536 aa	Known RBP	5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ZNF124	Q15973	351 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TNNI3K	Q59H18	835 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	JAML	Q86YT9	394 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	MRFAP1L1	Q96HT8	127 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	HHIPL1	Q96JK4	782 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PIF1	Q9H611	641 aa		5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.02	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ANKRD62	A6NC57	917 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	U2SURP	O15042	1029 aa	Known RBP	5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	KLF4	O43474	513 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TRHR	P34981	398 aa	Predicted RBP	5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CASP7	P55210	303 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	GRB10	Q13322	594 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	RAB33A	Q14088	237 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	BMS1	Q14692	1282 aa	Known RBP	5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NR1I3	Q14994	352 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	KCNA10	Q16322	511 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	GNPTAB	Q3T906	1256 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ZNF385B	Q569K4	471 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	HEATR6	Q6AI08	1181 aa	Known RBP	5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	POMZP3	Q6PJE2	187 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ZNF605	Q86T29	641 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	FIBCD1	Q8N539	461 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ERVK13-1	Q9NX77	482 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PRKAG3	Q9UGI9	489 aa		5.01	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	MEIS1	O00470	390 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SHOX	O15266	292 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PSPN	O60542	156 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	C1QTNF9	P0C862	333 aa		5	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms