RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 PARP3Q9Y6F1 533 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 UFL1O94874 794 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 RPN1P04843 607 aaKnown RBP14.14□□□□□ -0.15
SDHA-216ENST00000514027 LONP1P36776 959 aaKnown RBP14.14□□□□□ -0.15
SDHA-216ENST00000514027 GNAQP50148 359 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 PAK1Q13153 545 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 ARL6IP4Q66PJ3 421 aaKnown RBP14.14□□□□□ -0.15
SDHA-216ENST00000514027 TMED8Q6PL24 325 aaPredicted RBP14.14□□□□□ -0.15
SDHA-216ENST00000514027 FAM196AQ6ZSG2 479 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 UBXN4Q92575 508 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 LZTFL1Q9NQ48 299 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 SH3GLB2Q9NR46 395 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 GDAQ9Y2T3 454 aa14.14□□□□□ -0.15
SDHA-216ENST00000514027 NHSQ6T4R5 1651 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 CYTH3O43739 400 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 ZRANB2O95218 330 aaKnown RBP eCLIP14.13□□□□□ -0.15
SDHA-216ENST00000514027 CASP14P31944 242 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 BTDP43251 543 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 DTHD1Q6ZMT9 781 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 CCDC148Q8NFR7 591 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 NELFBQ8WX92 580 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 VPS16Q9H269 839 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 PCDHA6Q9UN73 950 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 PCDHA8Q9Y5H6 950 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 ROBO3Q96MS0 1386 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 N4BP3O15049 544 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 CCDC175P0C221 793 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 GPSM2P81274 684 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 SATB1Q01826 763 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 KRT31Q15323 416 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 SLC35G1Q2M3R5 365 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 EGFL6Q8IUX8 553 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 C4orf32Q8N8J7 132 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 CEP120Q8N960 986 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 PANX2Q96RD6 677 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 UBXN6Q9BZV1 441 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 TMEM60Q9H2L4 133 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 MRPL44Q9H9J2 332 aaKnown RBP14.13□□□□□ -0.15
SDHA-216ENST00000514027 DISC1Q9NRI5 854 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 RMND1Q9NWS8 449 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 TAB2Q9NYJ8 693 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 USP21Q9UK80 565 aa14.13□□□□□ -0.15
SDHA-216ENST00000514027 TAF1LQ8IZX4 1826 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 MFAP3LO75121 409 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 LDHCP07864 332 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 TPM1P09493 284 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 RASA1P20936 1047 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 ZNF658Q5TYW1 1059 aaPredicted RBP14.12□□□□□ -0.15
SDHA-216ENST00000514027 TEX11Q8IYF3 940 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 RTFDC1Q9BY42 306 aaPredicted RBP14.12□□□□□ -0.15
SDHA-216ENST00000514027 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 CXorf56Q9H5V9 222 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 RWDD2AQ9UIY3 292 aa14.12□□□□□ -0.15
SDHA-216ENST00000514027 STXBP3O00186 592 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 MAGEA9P43362 315 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 RAD9BQ6WBX8 426 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 CCDC91Q7Z6B0 441 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
SDHA-216ENST00000514027 EYA3Q99504 573 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 SRRTQ9BXP5 876 aaKnown RBP14.11□□□□□ -0.15
SDHA-216ENST00000514027 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 KCNJ18B7U540 433 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 KLRF2D3W0D1 207 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 PES1O00541 588 aaKnown RBP14.11□□□□□ -0.15
SDHA-216ENST00000514027 KIF1CO43896 1103 aaKnown RBP14.11□□□□□ -0.15
SDHA-216ENST00000514027 GYPCP04921 128 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 PBX1P40424 430 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 UBA7P41226 1012 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 FXR1P51114 621 aaKnown RBP eCLIP14.11□□□□□ -0.15
SDHA-216ENST00000514027 NAPAP54920 295 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 KCNJ12Q14500 433 aa14.11□□□□□ -0.15
SDHA-216ENST00000514027 NUP88Q99567 741 aaPredicted RBP14.11□□□□□ -0.15
SDHA-216ENST00000514027 IRX2Q9BZI1 471 aaPredicted RBP14.11□□□□□ -0.15
SDHA-216ENST00000514027 TRIM49BA6NDI0 452 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 M0R2N6 131 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 PRCPP42785 496 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 GSCP56915 257 aaPredicted RBP14.1□□□□□ -0.15
SDHA-216ENST00000514027 GRIPAP1Q4V328 841 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 PRR5LQ6MZQ0 368 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 CNGA4Q8IV77 575 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 ANKS1AQ92625 1134 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 ZNF287Q9HBT7 754 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 VAT1LQ9HCJ6 419 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 CD209Q9NNX6 404 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 A0A0U1RQJ8 604 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 TADA3O75528 432 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 OAS2P29728 719 aaKnown RBP14.1□□□□□ -0.15
SDHA-216ENST00000514027 CDK8P49336 464 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 COPB1P53618 953 aaKnown RBP14.1□□□□□ -0.15
SDHA-216ENST00000514027 PPP4CP60510 307 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 LETM2Q2VYF4 491 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 TCP11X2Q5H9J9 407 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 USP17L2Q6R6M4 530 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 TMCO3Q6UWJ1 677 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 ATRIPQ8WXE1 791 aa14.1□□□□□ -0.15
SDHA-216ENST00000514027 NAA15Q9BXJ9 866 aaKnown RBP14.1□□□□□ -0.15
SDHA-216ENST00000514027 TCP11L1Q9NUJ3 509 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms