RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TCEAL5Q5H9L2 206 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 METTL24Q5JXM2 366 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 SPATC1LQ9H0A9 340 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 TRPV6Q9H1D0 765 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 MROH8Q9H579 483 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 SIP14410 1827 aa9.53□□□□□ -0.88
CLDND1-229ENST00000513988 PDGFBP01127 241 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-229ENST00000513988 IFIT1P09914 478 aaKnown RBP9.52□□□□□ -0.89
CLDND1-229ENST00000513988 FCER1AP12319 257 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 BTDP43251 543 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 JAG1P78504 1218 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 DMWDQ09019 674 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 SMAD4Q13485 552 aaKnown RBP9.52□□□□□ -0.89
CLDND1-229ENST00000513988 COL19A1Q14993 1142 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 RPAINQ86UA6 219 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 NCAPG2Q86XI2 1143 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 C12orf42Q96LP6 360 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.89
CLDND1-229ENST00000513988 GINM1Q9NU53 330 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
CLDND1-229ENST00000513988 SCN5AQ14524 2016 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 LINC01553A4QN01 128 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 NCK2O43639 380 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 B4GALT4O60513 344 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 GDF11O95390 407 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 LMNAP02545 664 aaKnown RBP9.51□□□□□ -0.89
CLDND1-229ENST00000513988 VCAM1P19320 739 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 DZIP1Q86YF9 867 aaKnown RBP9.51□□□□□ -0.89
CLDND1-229ENST00000513988 SLF2Q8IX21 1173 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 TMEM105Q8N8V8 129 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 LINS1Q8NG48 757 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 RIPOR3Q96MK2 946 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 NSUN3Q9H649 340 aaKnown RBP9.51□□□□□ -0.89
CLDND1-229ENST00000513988 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 ZBTB21Q9ULJ3 1066 aa9.51□□□□□ -0.89
CLDND1-229ENST00000513988 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
CLDND1-229ENST00000513988 ZNFX1Q9P2E3 1918 aaKnown RBP9.5□□□□□ -0.89
CLDND1-229ENST00000513988 OTOGLQ3ZCN5 2332 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 BAIAP3O94812 1187 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 PDE8BO95263 885 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 PGK2P07205 417 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 RFC2P35250 354 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 LTBRP36941 435 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 USP14P54578 494 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 ITGA7Q13683 1181 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 PLS1Q14651 629 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-229ENST00000513988 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-229ENST00000513988 RAD9AQ99638 391 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 SEZ6LQ9BYH1 1024 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 UPF3AQ9H1J1 476 aaKnown RBP9.5□□□□□ -0.89
CLDND1-229ENST00000513988 ZHX1Q9UKY1 873 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-229ENST00000513988 TNKSO95271 1327 aa9.5□□□□□ -0.89
CLDND1-229ENST00000513988 LOC730098B7Z3J9 87 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 CABYRO75952 493 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 SDHBP21912 280 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 GJA9P57773 515 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 MMRN1Q13201 1228 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
CLDND1-229ENST00000513988 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 MMP19Q99542 508 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 TRIM34Q9BYJ4 488 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 SIL1Q9H173 461 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 SEMA4AQ9H3S1 761 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 RPAP3Q9H6T3 665 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-229ENST00000513988 PI4KBQ9UBF8 816 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 CD207Q9UJ71 328 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 DIS3Q9Y2L1 958 aaKnown RBP9.49□□□□□ -0.89
CLDND1-229ENST00000513988 MYO7AQ13402 2215 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 ASPMQ8IZT6 3477 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 SALL1Q9NSC2 1324 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
CLDND1-229ENST00000513988 PTPRSQ13332 1948 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 ADRB1P08588 477 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 RHBDL3P58872 404 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 WDR5P61964 334 aaKnown RBP9.48□□□□□ -0.89
CLDND1-229ENST00000513988 DLX2Q07687 328 aaPredicted RBP9.48□□□□□ -0.89
CLDND1-229ENST00000513988 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
CLDND1-229ENST00000513988 CBX2Q14781 532 aaPredicted RBP9.48□□□□□ -0.89
CLDND1-229ENST00000513988 PUM3Q15397 648 aaKnown RBP9.48□□□□□ -0.89
CLDND1-229ENST00000513988 ZNF792Q3KQV3 632 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
CLDND1-229ENST00000513988 VGLL2Q8N8G2 317 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 C17orf80Q9BSJ5 609 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 STK31Q9BXU1 1019 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 HOXC10Q9NYD6 342 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 PCDHGC5Q9Y5F6 944 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 MROH7-TTC4A0A0A0MT08 1334 aa9.48□□□□□ -0.89
CLDND1-229ENST00000513988 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms