RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SMCR8Q8TEV9 937 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 GTF3C2Q8WUA4 911 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 CHURC1Q8WUH1 139 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 NUP133Q8WUM0 1156 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 NUP88Q99567 741 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 MYL10Q9BUA6 226 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 ASCC2Q9H1I8 757 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 RBM28Q9NW13 759 aaKnown RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 FEM1BQ9UK73 627 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 BRPF3Q9ULD4 1205 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 KIAA1217Q5T5P2 1943 aa8.84□□□□□ -1
HMGXB3-204ENST00000513318 FRMPD2Q68DX3 1309 aaPredicted RBP8.83□□□□□ -1
HMGXB3-204ENST00000513318 ADGRA2Q96PE1 1338 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
HMGXB3-204ENST00000513318 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 TMEM232C9JQI7 657 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 CA12O43570 354 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 FDX1P10109 184 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 RXRAP19793 462 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
HMGXB3-204ENST00000513318 HERVK_113P62684 666 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 IKQ13123 557 aaPredicted RBP8.83□□□□□ -1
HMGXB3-204ENST00000513318 COG2Q14746 738 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 RTN1Q16799 776 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 GPR153Q6NV75 609 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 BTNL9Q6UXG8 535 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 PRPF38AQ8NAV1 312 aaKnown RBP8.83□□□□□ -1
HMGXB3-204ENST00000513318 ZNF274Q96GC6 653 aaPredicted RBP8.83□□□□□ -1
HMGXB3-204ENST00000513318 SLF1Q9BQI6 1058 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 BEGAINQ9BUH8 593 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 CFHR5Q9BXR6 569 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 ZFYVE28Q9HCC9 887 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 FBXO28Q9NVF7 368 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 SAGE1Q9NXZ1 904 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 MAD2L2Q9UI95 211 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 PPP1R9AQ9ULJ8 1098 aa8.83□□□□□ -1
HMGXB3-204ENST00000513318 NAP1L2Q9ULW6 460 aaPredicted RBP8.83□□□□□ -1
HMGXB3-204ENST00000513318 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 CCDC196A0A1B0GTZ2 297 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 PALM3A6NDB9 673 aaPredicted RBP8.82□□□□□ -1
HMGXB3-204ENST00000513318 KLRF2D3W0D1 207 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 TLR2O60603 784 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 GOLGA8HP0CJ92 632 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 CYP2C8P10632 490 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 SMARCA1P28370 1054 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 PDIA3P30101 505 aaKnown RBP8.82□□□□□ -1
HMGXB3-204ENST00000513318 GCLCP48506 637 aaPredicted RBP8.82□□□□□ -1
HMGXB3-204ENST00000513318 MCM2P49736 904 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 GNAQP50148 359 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 ARSIQ5FYB1 569 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 SYDE2Q5VT97 1194 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 RAB11FIP4Q86YS3 637 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 CCDC144CPQ8IYA2 1237 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 ZNF710Q8N1W2 664 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 MB21D1Q8N884 522 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 JMYQ8N9B5 988 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 FANCBQ8NB91 859 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 KHSRPQ92945 711 aaKnown RBP eCLIP8.82□□□□□ -19e-6■■■□□ 17.9
HMGXB3-204ENST00000513318 CHMP4CQ96CF2 233 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 ATG4CQ96DT6 458 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 LZTS2Q9BRK4 669 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 RNF186Q9NXI6 227 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 HOXC10Q9NYD6 342 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 MYH15Q9Y2K3 1946 aa8.82□□□□□ -1
HMGXB3-204ENST00000513318 DPYSL4O14531 572 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 TRPA1O75762 1119 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 CRHR2Q13324 411 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 FAM110CQ1W6H9 321 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 TMTC3Q6ZXV5 915 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 NOL8Q76FK4 1167 aaKnown RBP8.81□□□□□ -1
HMGXB3-204ENST00000513318 KIFC2Q96AC6 838 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 ZSCAN31Q96LW9 406 aaPredicted RBP8.81□□□□□ -1
HMGXB3-204ENST00000513318 P2RX7Q99572 595 aaKnown RBP8.81□□□□□ -1
HMGXB3-204ENST00000513318 SPZ1Q9BXG8 430 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 SLKQ9H2G2 1235 aaPredicted RBP8.81□□□□□ -1
HMGXB3-204ENST00000513318 SH2B1Q9NRF2 756 aaPredicted RBP8.81□□□□□ -1
HMGXB3-204ENST00000513318 PRR12Q9ULL5 1215 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 TPCN1Q9ULQ1 816 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 ADAMTS5Q9UNA0 930 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 LIMCH1Q9UPQ0 1083 aa8.81□□□□□ -1
HMGXB3-204ENST00000513318 ARIH1Q9Y4X5 557 aaPredicted RBP8.81□□□□□ -1
HMGXB3-204ENST00000513318 CNTNAP5Q8WYK1 1306 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 LRRC37A2A6NM11 1700 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 VWA5AO00534 786 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 CPLX1O14810 134 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 PFKFB2O60825 505 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 ZBED4O75132 1171 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 PLEKHA8P1O95397 391 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 BCRP11274 1271 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 HOXB1P14653 301 aaPredicted RBP8.8□□□□□ -1
HMGXB3-204ENST00000513318 CDC27P30260 824 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 SLC16A2P36021 539 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 OAZ1P54368 228 aa8.8□□□□□ -1
HMGXB3-204ENST00000513318 ERVK-9P63128 1117 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms