RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 RNF135Q8IUD6 432 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
PTPN20-228ENST00000513266 WWC1Q8IX03 1113 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 MAP1BP46821 2468 aaKnown RBP11.77□□□□□ -0.53
PTPN20-228ENST00000513266 NLRC5Q86WI3 1866 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 ATRXP46100 2492 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 ACTN1P12814 892 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 VCPP55072 806 aaKnown RBP11.76□□□□□ -0.53
PTPN20-228ENST00000513266 PPP4CP60510 307 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
PTPN20-228ENST00000513266 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 ADGRA1Q86SQ6 560 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 FBXL6Q8N531 539 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
PTPN20-228ENST00000513266 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
PTPN20-228ENST00000513266 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 ASTN1O14525 1302 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 IL16Q14005 1332 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 ZFHX4Q86UP3 3567 aa11.76□□□□□ -0.53
PTPN20-228ENST00000513266 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-228ENST00000513266 H0Y858 1186 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 FLOT1O75955 427 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 BAG3O95817 575 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 PLCG2P16885 1265 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 ERVK-21P61565 698 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 ACVR2BQ13705 512 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 SEPT2Q15019 361 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-228ENST00000513266 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 TMCO2Q7Z6W1 182 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-228ENST00000513266 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 XAGE2Q96GT9 111 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 FAM50BQ9Y247 325 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 DNAH14Q0VDD8 3507 aa11.75□□□□□ -0.53
PTPN20-228ENST00000513266 CYP2C9P11712 490 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 SHMT1P34896 483 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-228ENST00000513266 PSMC6P62333 389 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 CNTNAP3BQ96NU0 1288 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 FSD1Q9BTV5 496 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 IRF2BPLQ9H1B7 796 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-228ENST00000513266 SERPINB13Q9UIV8 391 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 ADAMTS5Q9UNA0 930 aa11.74□□□□□ -0.53
PTPN20-228ENST00000513266 DNAJC25-GNG10A0A024R161 153 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 CABYRO75952 493 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-228ENST00000513266 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 PABPC5Q96DU9 382 aaKnown RBP11.73□□□□□ -0.53
PTPN20-228ENST00000513266 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
PTPN20-228ENST00000513266 EHD4Q9H223 541 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 ALDH8A1Q9H2A2 487 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-228ENST00000513266 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 CABP5Q9NP86 173 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
PTPN20-228ENST00000513266 LRP2BPQ9P2M1 347 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
PTPN20-228ENST00000513266 SCN10AQ9Y5Y9 1956 aa11.73□□□□□ -0.53
PTPN20-228ENST00000513266 CEP250Q9BV73 2442 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 PTGS1P23219 599 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 STAT3P40763 770 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 MVPQ14764 893 aaKnown RBP11.72□□□□□ -0.53
PTPN20-228ENST00000513266 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
PTPN20-228ENST00000513266 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-228ENST00000513266 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
PTPN20-228ENST00000513266 FGD4Q96M96 766 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 SEZ6LQ9BYH1 1024 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
PTPN20-228ENST00000513266 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-228ENST00000513266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-228ENST00000513266 SPTBN2O15020 2390 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-228ENST00000513266 AVPR2P30518 371 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 RFC2P35250 354 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 LTBRP36941 435 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 NBL1P41271 181 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 MCAMP43121 646 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
PTPN20-228ENST00000513266 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
PTPN20-228ENST00000513266 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
PTPN20-228ENST00000513266 EP400NLQ6ZTU2 488 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 REPS2Q8NFH8 660 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 POP1Q99575 1024 aaKnown RBP11.71□□□□□ -0.53
PTPN20-228ENST00000513266 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN20-228ENST00000513266 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
PTPN20-228ENST00000513266 TNKSO95271 1327 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 VWA5AO00534 786 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 BAIAP3O94812 1187 aa11.7□□□□□ -0.54
PTPN20-228ENST00000513266 IQCF3P0C7M6 154 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms