RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 MTFR1Q15390 333 aa11.47□□□□□ -0.57
TRIO-220ENST00000512979 AS3MTQ9HBK9 375 aa11.47□□□□□ -0.57
TRIO-220ENST00000512979 IGSF5Q9NSI5 407 aa11.47□□□□□ -0.57
TRIO-220ENST00000512979 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
TRIO-220ENST00000512979 CENPFP49454 3210 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 TMEM229AB2RXF0 380 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 NAA30Q147X3 362 aaPredicted RBP11.46□□□□□ -0.57
TRIO-220ENST00000512979 HSP90AB4PQ58FF6 505 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.57
TRIO-220ENST00000512979 ANKRD13CQ8N6S4 541 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 MIGA1Q8NAN2 632 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 ANTXR1Q9H6X2 564 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 DNAJC18Q9H819 358 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 IL1RAPL2Q9NP60 686 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
TRIO-220ENST00000512979 PALD1Q9ULE6 856 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 GABRQQ9UN88 632 aa11.46□□□□□ -0.57
TRIO-220ENST00000512979 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.58
TRIO-220ENST00000512979 PTPRFP10586 1907 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 TNPO2O14787 897 aaKnown RBP11.45□□□□□ -0.58
TRIO-220ENST00000512979 GDF11O95390 407 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 ASNSP08243 561 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 USP5P45974 858 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 FLT3LGP49771 235 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 UBXN2AP68543 259 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 SKOR1P84550 965 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 ARHGAP4P98171 946 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 PABPC4Q13310 644 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIO-220ENST00000512979 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
TRIO-220ENST00000512979 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 DCTN4Q9UJW0 460 aa11.45□□□□□ -0.58
TRIO-220ENST00000512979 BRCA2P51587 3418 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 ADCY3O60266 1144 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 STAU1O95793 577 aaKnown RBP11.44□□□□□ -0.58
TRIO-220ENST00000512979 CCL5P13501 91 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 IGFBP4P22692 258 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 BACE1P56817 501 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 JAG1P78504 1218 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 MAP3K12Q12852 859 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 FAM110CQ1W6H9 321 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
TRIO-220ENST00000512979 METTL16Q86W50 562 aaKnown RBP11.44□□□□□ -0.58
TRIO-220ENST00000512979 CERS3Q8IU89 383 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 COA7Q96BR5 231 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 GCC1Q96CN9 775 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 SHISA4Q96DD7 197 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 WDR18Q9BV38 432 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 RNF208Q9H0X6 261 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
TRIO-220ENST00000512979 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 DDX19BQ9UMR2 479 aa11.44□□□□□ -0.58
TRIO-220ENST00000512979 HMMRO75330 724 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 ELNP15502 786 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
TRIO-220ENST00000512979 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
TRIO-220ENST00000512979 PLA2G2CQ5R387 149 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 RPAP2Q8IXW5 612 aaPredicted RBP11.43□□□□□ -0.58
TRIO-220ENST00000512979 CLASRPQ8N2M8 674 aaKnown RBP11.43□□□□□ -0.58
TRIO-220ENST00000512979 SCG3Q8WXD2 468 aaKnown RBP11.43□□□□□ -0.58
TRIO-220ENST00000512979 COL26A1Q96A83 441 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 KIF1BPQ96EK5 621 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 ASB16Q96NS5 453 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 BCL11AQ9H165 835 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 OSBPL3Q9H4L5 887 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 ZBTB21Q9ULJ3 1066 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 SIPA1L1O43166 1804 aa11.43□□□□□ -0.58
TRIO-220ENST00000512979 MKI67P46013 3256 aaKnown RBP11.43□□□□□ -0.58
TRIO-220ENST00000512979 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
TRIO-220ENST00000512979 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 INHAP05111 366 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 GJB1P08034 283 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 IFIT2P09913 472 aaKnown RBP11.42□□□□□ -0.58
TRIO-220ENST00000512979 GJA8P48165 433 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 GDF10P55107 478 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 WNT7BP56706 349 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 TTF1Q15361 905 aaPredicted RBP11.42□□□□□ -0.58
TRIO-220ENST00000512979 TMED8Q6PL24 325 aaPredicted RBP11.42□□□□□ -0.58
TRIO-220ENST00000512979 DNAJC2Q99543 621 aaKnown RBP11.42□□□□□ -0.58
TRIO-220ENST00000512979 CYLDQ9NQC7 956 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 TMPRSS4Q9NRS4 437 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 ZBTB40Q9NUA8 1239 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 ATAD5Q96QE3 1844 aa11.42□□□□□ -0.58
TRIO-220ENST00000512979 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 MGAMO43451 1857 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 C19orf81C9J6K1 198 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 GH2P01242 217 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 HOXA7P31268 230 aaPredicted RBP11.41□□□□□ -0.58
TRIO-220ENST00000512979 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 HELQQ8TDG4 1101 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
TRIO-220ENST00000512979 RIOK1Q9BRS2 568 aaKnown RBP11.41□□□□□ -0.58
TRIO-220ENST00000512979 CHMP4BQ9H444 224 aaKnown RBP11.41□□□□□ -0.58
TRIO-220ENST00000512979 SERPINB13Q9UIV8 391 aa11.41□□□□□ -0.58
TRIO-220ENST00000512979 CDK5RAP2Q96SN8 1893 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms