RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 DDX19AQ9NUU7 478 aaKnown RBP9.76□□□□□ -0.85
VCAN-208ENST00000512590 FAM50BQ9Y247 325 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 SH3TC1Q8TE82 1336 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 GPC4O75487 556 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 DDHD2O94830 711 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 SERPIND1P05546 499 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 BRD2P25440 801 aaKnown RBP9.76□□□□□ -0.85
VCAN-208ENST00000512590 GJB2P29033 226 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 STX1BP61266 288 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 GNG11P61952 73 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 MYO1EQ12965 1108 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 RALGDSQ12967 914 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 KRT12Q99456 494 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 IFIH1Q9BYX4 1025 aaKnown RBP9.76□□□□□ -0.85
VCAN-208ENST00000512590 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 CTAGE15A4D2H0 777 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 ACTN4O43707 911 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 CTAGE8P0CG41 777 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 CENPAP49450 140 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 PPP2R5EQ16537 467 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 DBN1Q16643 649 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 CTAGE6Q86UF2 777 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 CTAGE4Q8IX94 777 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 TCP11Q8WWU5 503 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 IFT122Q9HBG6 1241 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 GIGYF1O75420 1035 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 GBP1P32455 592 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 PPP1R2P41236 205 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 CCDC183Q5T5S1 534 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 EFHBQ8N7U6 833 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 L3MBTL3Q96JM7 780 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 CAPZA3Q96KX2 299 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 TBC1D7Q9P0N9 293 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 MAGED2Q9UNF1 606 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 TXNDC9O14530 226 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 TIPRLO75663 272 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 ZBTB7AO95365 584 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 UBASH3AP57075 661 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 ASPHQ12797 758 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 DRP2Q13474 957 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 NAA30Q147X3 362 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 SNX29Q8TEQ0 813 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 MCUR1Q96AQ8 359 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 ATP1A1P05023 1023 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 HSPA8P11142 646 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 ARHGAP15Q53QZ3 475 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 AKAP4Q5JQC9 854 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 FBXL13Q8NEE6 735 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 DMAP1Q9NPF5 467 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 DDX25Q9UHL0 483 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 ZNF644Q9H582 1327 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 K7ENM7 598 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 ZNF197O14709 1029 aa9.75□□□□□ -0.85
VCAN-208ENST00000512590 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 DNAJC21Q5F1R6 531 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 MRPL46Q9H2W6 279 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
VCAN-208ENST00000512590 UHRF1BP1Q6BDS2 1440 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 RNF113AO15541 343 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 CA4P22748 312 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 DENND2CQ68D51 928 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 CEP68Q76N32 757 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 CCNYQ8ND76 341 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 NOC4LQ9BVI4 516 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.85
VCAN-208ENST00000512590 GUCA1AP43080 201 aaPredicted RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 AAASQ9NRG9 546 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 KRT82Q9NSB4 513 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 EIF3DO15371 548 aaKnown RBP eCLIP9.74□□□□□ -0.85
VCAN-208ENST00000512590 DDX5P17844 614 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 ARHGAP44Q17R89 818 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 ARL13BQ3SXY8 428 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 CCDC186Q7Z3E2 898 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 RTKN2Q8IZC4 609 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 CDKL2Q92772 493 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 BRF1Q92994 677 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 GSDMAQ96QA5 445 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 OLFML3Q9NRN5 406 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 SCHIP1Q9P0W5 487 aaPredicted RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 UTP11Q9Y3A2 253 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 PDE8AO60658 829 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 KRT15P19012 456 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 NPY2RP49146 381 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 STX17P56962 302 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 SREBF2Q12772 1141 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 NR1H3Q13133 447 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 CALCRLQ16602 461 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 NBPF10Q6P3W6 841 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 ADCK2Q7Z695 626 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.74□□□□□ -0.85
VCAN-208ENST00000512590 ZFYVE19Q96K21 471 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms